Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClockO08785 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClockO08785 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.13■□□□□ 0.49
ClockO08785 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClockO08785 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClockO08785 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.13■□□□□ 0.49
ClockO08785 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClockO08785 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ClockO08785 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClockO08785 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClockO08785 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ClockO08785 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClockO08785 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClockO08785 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.13■□□□□ 0.49
ClockO08785 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ClockO08785 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ClockO08785 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClockO08785 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClockO08785 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ClockO08785 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ClockO08785 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClockO08785 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
ClockO08785 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ClockO08785 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ClockO08785 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClockO08785 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClockO08785 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClockO08785 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ClockO08785 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClockO08785 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClockO08785 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClockO08785 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ClockO08785 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClockO08785 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClockO08785 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClockO08785 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.12■□□□□ 0.49
ClockO08785 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClockO08785 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.12■□□□□ 0.49
ClockO08785 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ClockO08785 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ClockO08785 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.11■□□□□ 0.49
ClockO08785 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ClockO08785 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.11■□□□□ 0.49
ClockO08785 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.11■□□□□ 0.49
ClockO08785 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
ClockO08785 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ClockO08785 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ClockO08785 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ClockO08785 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ClockO08785 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ClockO08785 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ClockO08785 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ClockO08785 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.11■□□□□ 0.49
ClockO08785 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ClockO08785 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClockO08785 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ClockO08785 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClockO08785 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClockO08785 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClockO08785 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClockO08785 Gm10232-201ENSMUST00000089221 720 ntBASIC18.1■□□□□ 0.49
ClockO08785 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClockO08785 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClockO08785 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClockO08785 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClockO08785 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.1■□□□□ 0.49
ClockO08785 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
ClockO08785 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ClockO08785 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClockO08785 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClockO08785 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.09■□□□□ 0.49
ClockO08785 Gm43530-201ENSMUST00000195920 274 ntBASIC18.09■□□□□ 0.49
ClockO08785 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClockO08785 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClockO08785 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClockO08785 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ClockO08785 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClockO08785 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ClockO08785 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClockO08785 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
ClockO08785 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.08■□□□□ 0.49
ClockO08785 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
ClockO08785 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
ClockO08785 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.08■□□□□ 0.48
ClockO08785 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.08■□□□□ 0.48
ClockO08785 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ClockO08785 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ClockO08785 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ClockO08785 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
ClockO08785 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ClockO08785 AA386476-201ENSMUST00000098781 1665 ntBASIC18.08■□□□□ 0.48
ClockO08785 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ClockO08785 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ClockO08785 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClockO08785 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClockO08785 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ClockO08785 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClockO08785 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClockO08785 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.07■□□□□ 0.48
ClockO08785 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms