Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Pcdh11xF6ZNL5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh11xF6ZNL5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh11xF6ZNL5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh11xF6ZNL5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh11xF6ZNL5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.19■□□□□ 0.98
Pcdh11xF6ZNL5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh11xF6ZNL5 Gm27801-201ENSMUST00000184174 223 ntBASIC21.19■□□□□ 0.98
Pcdh11xF6ZNL5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh11xF6ZNL5 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh11xF6ZNL5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.19■□□□□ 0.98
Pcdh11xF6ZNL5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Pcdh11xF6ZNL5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Pcdh11xF6ZNL5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh11xF6ZNL5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Pcdh11xF6ZNL5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh11xF6ZNL5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh11xF6ZNL5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh11xF6ZNL5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh11xF6ZNL5 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh11xF6ZNL5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Pcdh11xF6ZNL5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.18■□□□□ 0.98
Pcdh11xF6ZNL5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.18■□□□□ 0.98
Pcdh11xF6ZNL5 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh11xF6ZNL5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Pcdh11xF6ZNL5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh11xF6ZNL5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh11xF6ZNL5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Pcdh11xF6ZNL5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.18■□□□□ 0.98
Pcdh11xF6ZNL5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Pcdh11xF6ZNL5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh11xF6ZNL5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Pcdh11xF6ZNL5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh11xF6ZNL5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Pcdh11xF6ZNL5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh11xF6ZNL5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh11xF6ZNL5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.17■□□□□ 0.98
Pcdh11xF6ZNL5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh11xF6ZNL5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh11xF6ZNL5 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh11xF6ZNL5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Pcdh11xF6ZNL5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh11xF6ZNL5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Pcdh11xF6ZNL5 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.16■□□□□ 0.98
Pcdh11xF6ZNL5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh11xF6ZNL5 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh11xF6ZNL5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh11xF6ZNL5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh11xF6ZNL5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh11xF6ZNL5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh11xF6ZNL5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh11xF6ZNL5 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.15■□□□□ 0.98
Pcdh11xF6ZNL5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh11xF6ZNL5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh11xF6ZNL5 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdh11xF6ZNL5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh11xF6ZNL5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh11xF6ZNL5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh11xF6ZNL5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh11xF6ZNL5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdh11xF6ZNL5 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Pcdh11xF6ZNL5 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.14■□□□□ 0.98
Pcdh11xF6ZNL5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh11xF6ZNL5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.14■□□□□ 0.97
Pcdh11xF6ZNL5 Gm40848-201ENSMUST00000221998 324 ntBASIC21.14■□□□□ 0.97
Pcdh11xF6ZNL5 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.14■□□□□ 0.97
Pcdh11xF6ZNL5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Pcdh11xF6ZNL5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh11xF6ZNL5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh11xF6ZNL5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh11xF6ZNL5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.13■□□□□ 0.97
Pcdh11xF6ZNL5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pcdh11xF6ZNL5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh11xF6ZNL5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh11xF6ZNL5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh11xF6ZNL5 BC021767-201ENSMUST00000126387 1716 ntBASIC21.12■□□□□ 0.97
Pcdh11xF6ZNL5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pcdh11xF6ZNL5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh11xF6ZNL5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pcdh11xF6ZNL5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh11xF6ZNL5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh11xF6ZNL5 Gm43060-201ENSMUST00000200621 289 ntBASIC21.12■□□□□ 0.97
Pcdh11xF6ZNL5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh11xF6ZNL5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pcdh11xF6ZNL5 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh11xF6ZNL5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pcdh11xF6ZNL5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh11xF6ZNL5 Golph3-205ENSMUST00000228671 2842 ntBASIC21.12■□□□□ 0.97
Pcdh11xF6ZNL5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Pcdh11xF6ZNL5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.11■□□□□ 0.97
Pcdh11xF6ZNL5 Gm7860-201ENSMUST00000121190 879 ntBASIC21.11■□□□□ 0.97
Pcdh11xF6ZNL5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
Pcdh11xF6ZNL5 Gm5874-201ENSMUST00000096101 508 ntBASIC21.11■□□□□ 0.97
Pcdh11xF6ZNL5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh11xF6ZNL5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Pcdh11xF6ZNL5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh11xF6ZNL5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.11■□□□□ 0.97
Pcdh11xF6ZNL5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh11xF6ZNL5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh11xF6ZNL5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms