Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc149F6V035 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc149F6V035 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc149F6V035 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc149F6V035 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc149F6V035 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc149F6V035 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc149F6V035 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc149F6V035 Gm13148-201ENSMUST00000118892 745 ntBASIC19.4■□□□□ 0.7
Ccdc149F6V035 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Ccdc149F6V035 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc149F6V035 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.4■□□□□ 0.7
Ccdc149F6V035 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.4■□□□□ 0.7
Ccdc149F6V035 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc149F6V035 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc149F6V035 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc149F6V035 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc149F6V035 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc149F6V035 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc149F6V035 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.4■□□□□ 0.7
Ccdc149F6V035 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc149F6V035 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc149F6V035 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Ccdc149F6V035 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc149F6V035 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc149F6V035 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc149F6V035 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc149F6V035 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc149F6V035 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ccdc149F6V035 Gm6211-202ENSMUST00000167849 925 ntBASIC19.39■□□□□ 0.69
Ccdc149F6V035 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc149F6V035 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc149F6V035 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc149F6V035 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc149F6V035 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc149F6V035 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc149F6V035 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc149F6V035 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc149F6V035 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc149F6V035 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc149F6V035 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc149F6V035 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc149F6V035 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc149F6V035 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc149F6V035 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc149F6V035 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc149F6V035 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc149F6V035 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc149F6V035 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.37■□□□□ 0.69
Ccdc149F6V035 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc149F6V035 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.37■□□□□ 0.69
Ccdc149F6V035 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc149F6V035 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc149F6V035 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc149F6V035 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc149F6V035 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc149F6V035 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc149F6V035 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc149F6V035 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc149F6V035 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc149F6V035 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc149F6V035 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Ccdc149F6V035 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc149F6V035 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc149F6V035 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.36■□□□□ 0.69
Ccdc149F6V035 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.36■□□□□ 0.69
Ccdc149F6V035 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.36■□□□□ 0.69
Ccdc149F6V035 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc149F6V035 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.36■□□□□ 0.69
Ccdc149F6V035 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc149F6V035 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc149F6V035 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc149F6V035 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc149F6V035 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc149F6V035 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc149F6V035 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc149F6V035 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc149F6V035 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc149F6V035 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc149F6V035 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc149F6V035 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc149F6V035 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc149F6V035 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc149F6V035 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc149F6V035 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
Ccdc149F6V035 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc149F6V035 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc149F6V035 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc149F6V035 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Ccdc149F6V035 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc149F6V035 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc149F6V035 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc149F6V035 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc149F6V035 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc149F6V035 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc149F6V035 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.34■□□□□ 0.69
Ccdc149F6V035 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc149F6V035 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ccdc149F6V035 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.34■□□□□ 0.69
Ccdc149F6V035 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms