Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.75■□□□□ 0.43
Pcdh17E9PXF0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
Pcdh17E9PXF0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh17E9PXF0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh17E9PXF0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh17E9PXF0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh17E9PXF0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh17E9PXF0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.74■□□□□ 0.43
Pcdh17E9PXF0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh17E9PXF0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.74■□□□□ 0.43
Pcdh17E9PXF0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.74■□□□□ 0.43
Pcdh17E9PXF0 Gm38205-201ENSMUST00000192243 258 ntBASIC17.74■□□□□ 0.43
Pcdh17E9PXF0 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.74■□□□□ 0.43
Pcdh17E9PXF0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Pcdh17E9PXF0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh17E9PXF0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh17E9PXF0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh17E9PXF0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh17E9PXF0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh17E9PXF0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh17E9PXF0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh17E9PXF0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Pcdh17E9PXF0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh17E9PXF0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh17E9PXF0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh17E9PXF0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.73■□□□□ 0.43
Pcdh17E9PXF0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh17E9PXF0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh17E9PXF0 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.73■□□□□ 0.43
Pcdh17E9PXF0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pcdh17E9PXF0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh17E9PXF0 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.72■□□□□ 0.43
Pcdh17E9PXF0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh17E9PXF0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcdh17E9PXF0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh17E9PXF0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh17E9PXF0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Pcdh17E9PXF0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdh17E9PXF0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh17E9PXF0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh17E9PXF0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh17E9PXF0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh17E9PXF0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pcdh17E9PXF0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh17E9PXF0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Pcdh17E9PXF0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pcdh17E9PXF0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.71■□□□□ 0.43
Pcdh17E9PXF0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdh17E9PXF0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Pcdh17E9PXF0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdh17E9PXF0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdh17E9PXF0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdh17E9PXF0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdh17E9PXF0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdh17E9PXF0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh17E9PXF0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.7■□□□□ 0.42
Pcdh17E9PXF0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdh17E9PXF0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pcdh17E9PXF0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh17E9PXF0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Pcdh17E9PXF0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Pcdh17E9PXF0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh17E9PXF0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pcdh17E9PXF0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh17E9PXF0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Pcdh17E9PXF0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh17E9PXF0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh17E9PXF0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh17E9PXF0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh17E9PXF0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh17E9PXF0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Pcdh17E9PXF0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh17E9PXF0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh17E9PXF0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh17E9PXF0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdh17E9PXF0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh17E9PXF0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdh17E9PXF0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdh17E9PXF0 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.69■□□□□ 0.42
Pcdh17E9PXF0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdh17E9PXF0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh17E9PXF0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdh17E9PXF0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdh17E9PXF0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdh17E9PXF0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh17E9PXF0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh17E9PXF0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Pcdh17E9PXF0 Mir5133-201ENSMUST00000174955 77 ntBASIC17.68■□□□□ 0.42
Pcdh17E9PXF0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdh17E9PXF0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh17E9PXF0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.68■□□□□ 0.42
Pcdh17E9PXF0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh17E9PXF0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdh17E9PXF0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh17E9PXF0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdh17E9PXF0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh17E9PXF0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh17E9PXF0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh17E9PXF0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh17E9PXF0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms