Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.84■□□□□ 0.61
Srp54bE9PXC0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Srp54bE9PXC0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Srp54bE9PXC0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Srp54bE9PXC0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Srp54bE9PXC0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Srp54bE9PXC0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Srp54bE9PXC0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Srp54bE9PXC0 Gm4968-201ENSMUST00000071458 858 ntBASIC18.83■□□□□ 0.6
Srp54bE9PXC0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
Srp54bE9PXC0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Srp54bE9PXC0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54bE9PXC0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54bE9PXC0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.82■□□□□ 0.6
Srp54bE9PXC0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54bE9PXC0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54bE9PXC0 Gm13148-201ENSMUST00000118892 745 ntBASIC18.82■□□□□ 0.6
Srp54bE9PXC0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.82■□□□□ 0.6
Srp54bE9PXC0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54bE9PXC0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54bE9PXC0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54bE9PXC0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Srp54bE9PXC0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srp54bE9PXC0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srp54bE9PXC0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srp54bE9PXC0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srp54bE9PXC0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Srp54bE9PXC0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Srp54bE9PXC0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Srp54bE9PXC0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.81■□□□□ 0.6
Srp54bE9PXC0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srp54bE9PXC0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Srp54bE9PXC0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srp54bE9PXC0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Srp54bE9PXC0 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.81■□□□□ 0.6
Srp54bE9PXC0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srp54bE9PXC0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srp54bE9PXC0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srp54bE9PXC0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Srp54bE9PXC0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srp54bE9PXC0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.8■□□□□ 0.6
Srp54bE9PXC0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.8■□□□□ 0.6
Srp54bE9PXC0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srp54bE9PXC0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Srp54bE9PXC0 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.8■□□□□ 0.6
Srp54bE9PXC0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Srp54bE9PXC0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
Srp54bE9PXC0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srp54bE9PXC0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srp54bE9PXC0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Srp54bE9PXC0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srp54bE9PXC0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Srp54bE9PXC0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srp54bE9PXC0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Srp54bE9PXC0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srp54bE9PXC0 Gm5408-201ENSMUST00000197998 747 ntBASIC18.79■□□□□ 0.6
Srp54bE9PXC0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srp54bE9PXC0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srp54bE9PXC0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srp54bE9PXC0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.79■□□□□ 0.6
Srp54bE9PXC0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srp54bE9PXC0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srp54bE9PXC0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srp54bE9PXC0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srp54bE9PXC0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srp54bE9PXC0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srp54bE9PXC0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.78■□□□□ 0.6
Srp54bE9PXC0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Srp54bE9PXC0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srp54bE9PXC0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srp54bE9PXC0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srp54bE9PXC0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srp54bE9PXC0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Srp54bE9PXC0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Srp54bE9PXC0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Srp54bE9PXC0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Srp54bE9PXC0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Srp54bE9PXC0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Srp54bE9PXC0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Srp54bE9PXC0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.77■□□□□ 0.6
Srp54bE9PXC0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Srp54bE9PXC0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Srp54bE9PXC0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.77■□□□□ 0.59
Srp54bE9PXC0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srp54bE9PXC0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srp54bE9PXC0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srp54bE9PXC0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srp54bE9PXC0 Gm6211-202ENSMUST00000167849 925 ntBASIC18.76■□□□□ 0.59
Srp54bE9PXC0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srp54bE9PXC0 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.76■□□□□ 0.59
Srp54bE9PXC0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Srp54bE9PXC0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srp54bE9PXC0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srp54bE9PXC0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Srp54bE9PXC0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Srp54bE9PXC0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Srp54bE9PXC0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.75■□□□□ 0.59
Srp54bE9PXC0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Srp54bE9PXC0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Srp54bE9PXC0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms