Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rfx8D3YU81 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx8D3YU81 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx8D3YU81 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx8D3YU81 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.22■□□□□ 0.83
Rfx8D3YU81 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.22■□□□□ 0.83
Rfx8D3YU81 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx8D3YU81 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx8D3YU81 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.22■□□□□ 0.83
Rfx8D3YU81 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx8D3YU81 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx8D3YU81 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx8D3YU81 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rfx8D3YU81 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx8D3YU81 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx8D3YU81 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx8D3YU81 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx8D3YU81 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx8D3YU81 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.21■□□□□ 0.83
Rfx8D3YU81 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx8D3YU81 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rfx8D3YU81 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx8D3YU81 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx8D3YU81 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Rfx8D3YU81 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rfx8D3YU81 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx8D3YU81 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx8D3YU81 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx8D3YU81 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx8D3YU81 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Rfx8D3YU81 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Rfx8D3YU81 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx8D3YU81 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx8D3YU81 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx8D3YU81 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx8D3YU81 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx8D3YU81 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rfx8D3YU81 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx8D3YU81 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx8D3YU81 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx8D3YU81 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx8D3YU81 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.19■□□□□ 0.82
Rfx8D3YU81 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx8D3YU81 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx8D3YU81 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx8D3YU81 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.19■□□□□ 0.82
Rfx8D3YU81 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx8D3YU81 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx8D3YU81 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx8D3YU81 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx8D3YU81 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx8D3YU81 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.18■□□□□ 0.82
Rfx8D3YU81 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Rfx8D3YU81 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx8D3YU81 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx8D3YU81 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx8D3YU81 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Rfx8D3YU81 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx8D3YU81 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx8D3YU81 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx8D3YU81 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx8D3YU81 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx8D3YU81 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx8D3YU81 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx8D3YU81 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx8D3YU81 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx8D3YU81 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx8D3YU81 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.17■□□□□ 0.82
Rfx8D3YU81 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.17■□□□□ 0.82
Rfx8D3YU81 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.17■□□□□ 0.82
Rfx8D3YU81 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx8D3YU81 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx8D3YU81 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx8D3YU81 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rfx8D3YU81 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfx8D3YU81 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfx8D3YU81 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.16■□□□□ 0.82
Rfx8D3YU81 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rfx8D3YU81 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
Rfx8D3YU81 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.16■□□□□ 0.82
Rfx8D3YU81 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfx8D3YU81 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx8D3YU81 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx8D3YU81 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Rfx8D3YU81 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.15■□□□□ 0.82
Rfx8D3YU81 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx8D3YU81 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Rfx8D3YU81 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rfx8D3YU81 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx8D3YU81 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx8D3YU81 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx8D3YU81 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rfx8D3YU81 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rfx8D3YU81 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.82
Rfx8D3YU81 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx8D3YU81 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx8D3YU81 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx8D3YU81 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx8D3YU81 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx8D3YU81 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms