Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv4A0A075B5I2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv4A0A075B5I2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trbv4A0A075B5I2 Gm26833-201ENSMUST00000180899 440 ntBASIC19.21■□□□□ 0.67
Trbv4A0A075B5I2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv4A0A075B5I2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv4A0A075B5I2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trbv4A0A075B5I2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv4A0A075B5I2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv4A0A075B5I2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv4A0A075B5I2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv4A0A075B5I2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv4A0A075B5I2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv4A0A075B5I2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv4A0A075B5I2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.2■□□□□ 0.66
Trbv4A0A075B5I2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv4A0A075B5I2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv4A0A075B5I2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Trbv4A0A075B5I2 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.2■□□□□ 0.66
Trbv4A0A075B5I2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv4A0A075B5I2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv4A0A075B5I2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.2■□□□□ 0.66
Trbv4A0A075B5I2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv4A0A075B5I2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv4A0A075B5I2 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.19■□□□□ 0.66
Trbv4A0A075B5I2 Gm40848-201ENSMUST00000221998 324 ntBASIC19.19■□□□□ 0.66
Trbv4A0A075B5I2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv4A0A075B5I2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trbv4A0A075B5I2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv4A0A075B5I2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trbv4A0A075B5I2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv4A0A075B5I2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv4A0A075B5I2 Golph3-205ENSMUST00000228671 2842 ntBASIC19.18■□□□□ 0.66
Trbv4A0A075B5I2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.18■□□□□ 0.66
Trbv4A0A075B5I2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.18■□□□□ 0.66
Trbv4A0A075B5I2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv4A0A075B5I2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv4A0A075B5I2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trbv4A0A075B5I2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv4A0A075B5I2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv4A0A075B5I2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv4A0A075B5I2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv4A0A075B5I2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv4A0A075B5I2 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.17■□□□□ 0.66
Trbv4A0A075B5I2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv4A0A075B5I2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.17■□□□□ 0.66
Trbv4A0A075B5I2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv4A0A075B5I2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Trbv4A0A075B5I2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trbv4A0A075B5I2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv4A0A075B5I2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv4A0A075B5I2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv4A0A075B5I2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv4A0A075B5I2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trbv4A0A075B5I2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trbv4A0A075B5I2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv4A0A075B5I2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv4A0A075B5I2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv4A0A075B5I2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trbv4A0A075B5I2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.16■□□□□ 0.66
Trbv4A0A075B5I2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv4A0A075B5I2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv4A0A075B5I2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trbv4A0A075B5I2 BC021767-201ENSMUST00000126387 1716 ntBASIC19.16■□□□□ 0.66
Trbv4A0A075B5I2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv4A0A075B5I2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trbv4A0A075B5I2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv4A0A075B5I2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv4A0A075B5I2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trbv4A0A075B5I2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Gm7860-201ENSMUST00000121190 879 ntBASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv4A0A075B5I2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.14■□□□□ 0.66
Trbv4A0A075B5I2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trbv4A0A075B5I2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
Trbv4A0A075B5I2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Trbv4A0A075B5I2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv4A0A075B5I2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv4A0A075B5I2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 7.8 ms