Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cdh17Q9R100 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh17Q9R100 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh17Q9R100 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh17Q9R100 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh17Q9R100 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh17Q9R100 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Cdh17Q9R100 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh17Q9R100 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.72■□□□□ 0.59
Cdh17Q9R100 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh17Q9R100 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh17Q9R100 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh17Q9R100 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.72■□□□□ 0.59
Cdh17Q9R100 Spcs1-204ENSMUST00000226782 949 ntBASIC18.72■□□□□ 0.59
Cdh17Q9R100 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh17Q9R100 Gm9847-201ENSMUST00000052528 599 ntBASIC18.72■□□□□ 0.59
Cdh17Q9R100 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cdh17Q9R100 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh17Q9R100 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh17Q9R100 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh17Q9R100 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh17Q9R100 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh17Q9R100 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh17Q9R100 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cdh17Q9R100 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cdh17Q9R100 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh17Q9R100 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh17Q9R100 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
Cdh17Q9R100 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh17Q9R100 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh17Q9R100 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cdh17Q9R100 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh17Q9R100 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh17Q9R100 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh17Q9R100 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.7■□□□□ 0.58
Cdh17Q9R100 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh17Q9R100 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh17Q9R100 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh17Q9R100 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Cdh17Q9R100 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh17Q9R100 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh17Q9R100 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh17Q9R100 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh17Q9R100 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.7■□□□□ 0.58
Cdh17Q9R100 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cdh17Q9R100 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cdh17Q9R100 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh17Q9R100 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh17Q9R100 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh17Q9R100 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh17Q9R100 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh17Q9R100 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh17Q9R100 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh17Q9R100 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh17Q9R100 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh17Q9R100 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh17Q9R100 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh17Q9R100 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh17Q9R100 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh17Q9R100 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.69■□□□□ 0.58
Cdh17Q9R100 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.69■□□□□ 0.58
Cdh17Q9R100 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh17Q9R100 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh17Q9R100 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.69■□□□□ 0.58
Cdh17Q9R100 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh17Q9R100 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh17Q9R100 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh17Q9R100 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh17Q9R100 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cdh17Q9R100 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh17Q9R100 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.68■□□□□ 0.58
Cdh17Q9R100 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh17Q9R100 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh17Q9R100 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh17Q9R100 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh17Q9R100 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh17Q9R100 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh17Q9R100 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh17Q9R100 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh17Q9R100 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cdh17Q9R100 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh17Q9R100 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh17Q9R100 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh17Q9R100 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh17Q9R100 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Cdh17Q9R100 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh17Q9R100 Gm12251-201ENSMUST00000117893 792 ntBASIC18.67■□□□□ 0.58
Cdh17Q9R100 Gm43137-201ENSMUST00000198052 594 ntBASIC18.67■□□□□ 0.58
Cdh17Q9R100 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh17Q9R100 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh17Q9R100 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh17Q9R100 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh17Q9R100 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh17Q9R100 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Cdh17Q9R100 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh17Q9R100 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cdh17Q9R100 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh17Q9R100 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.66■□□□□ 0.58
Cdh17Q9R100 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh17Q9R100 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms