Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Nubp1Q9R060 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nubp1Q9R060 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nubp1Q9R060 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.7■□□□□ 0.26
Nubp1Q9R060 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.7■□□□□ 0.26
Nubp1Q9R060 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.7■□□□□ 0.26
Nubp1Q9R060 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nubp1Q9R060 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Nubp1Q9R060 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nubp1Q9R060 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.7■□□□□ 0.26
Nubp1Q9R060 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nubp1Q9R060 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nubp1Q9R060 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nubp1Q9R060 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nubp1Q9R060 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nubp1Q9R060 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nubp1Q9R060 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nubp1Q9R060 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC16.69■□□□□ 0.26
Nubp1Q9R060 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.69■□□□□ 0.26
Nubp1Q9R060 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nubp1Q9R060 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nubp1Q9R060 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Nubp1Q9R060 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nubp1Q9R060 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nubp1Q9R060 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nubp1Q9R060 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nubp1Q9R060 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nubp1Q9R060 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nubp1Q9R060 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nubp1Q9R060 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nubp1Q9R060 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nubp1Q9R060 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nubp1Q9R060 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nubp1Q9R060 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nubp1Q9R060 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Nubp1Q9R060 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Nubp1Q9R060 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.67■□□□□ 0.26
Nubp1Q9R060 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nubp1Q9R060 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nubp1Q9R060 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nubp1Q9R060 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nubp1Q9R060 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nubp1Q9R060 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Nubp1Q9R060 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Nubp1Q9R060 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nubp1Q9R060 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Nubp1Q9R060 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nubp1Q9R060 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.67■□□□□ 0.26
Nubp1Q9R060 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nubp1Q9R060 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nubp1Q9R060 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Nubp1Q9R060 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nubp1Q9R060 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nubp1Q9R060 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nubp1Q9R060 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.67■□□□□ 0.26
Nubp1Q9R060 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nubp1Q9R060 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nubp1Q9R060 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp1Q9R060 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp1Q9R060 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp1Q9R060 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.66■□□□□ 0.26
Nubp1Q9R060 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Nubp1Q9R060 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp1Q9R060 Gm6576-201ENSMUST00000169678 883 ntBASIC16.66■□□□□ 0.26
Nubp1Q9R060 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.66■□□□□ 0.26
Nubp1Q9R060 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp1Q9R060 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp1Q9R060 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.66■□□□□ 0.26
Nubp1Q9R060 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp1Q9R060 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nubp1Q9R060 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp1Q9R060 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp1Q9R060 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nubp1Q9R060 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nubp1Q9R060 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nubp1Q9R060 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nubp1Q9R060 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nubp1Q9R060 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC16.65■□□□□ 0.26
Nubp1Q9R060 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nubp1Q9R060 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nubp1Q9R060 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nubp1Q9R060 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Nubp1Q9R060 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nubp1Q9R060 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nubp1Q9R060 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nubp1Q9R060 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nubp1Q9R060 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nubp1Q9R060 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.64■□□□□ 0.25
Nubp1Q9R060 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nubp1Q9R060 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.64■□□□□ 0.25
Nubp1Q9R060 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nubp1Q9R060 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nubp1Q9R060 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nubp1Q9R060 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nubp1Q9R060 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nubp1Q9R060 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nubp1Q9R060 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.64■□□□□ 0.25
Nubp1Q9R060 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nubp1Q9R060 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nubp1Q9R060 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms