Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Shroom3Q9QXN0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shroom3Q9QXN0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Shroom3Q9QXN0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shroom3Q9QXN0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shroom3Q9QXN0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shroom3Q9QXN0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shroom3Q9QXN0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shroom3Q9QXN0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shroom3Q9QXN0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shroom3Q9QXN0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shroom3Q9QXN0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shroom3Q9QXN0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shroom3Q9QXN0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shroom3Q9QXN0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Shroom3Q9QXN0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Shroom3Q9QXN0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Shroom3Q9QXN0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
Shroom3Q9QXN0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
Shroom3Q9QXN0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.3■□□□□ 0.68
Shroom3Q9QXN0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shroom3Q9QXN0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shroom3Q9QXN0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.3■□□□□ 0.68
Shroom3Q9QXN0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.3■□□□□ 0.68
Shroom3Q9QXN0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shroom3Q9QXN0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shroom3Q9QXN0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Shroom3Q9QXN0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shroom3Q9QXN0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shroom3Q9QXN0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shroom3Q9QXN0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shroom3Q9QXN0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.29■□□□□ 0.68
Shroom3Q9QXN0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Shroom3Q9QXN0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shroom3Q9QXN0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shroom3Q9QXN0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shroom3Q9QXN0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom3Q9QXN0 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.28■□□□□ 0.68
Shroom3Q9QXN0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom3Q9QXN0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom3Q9QXN0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom3Q9QXN0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom3Q9QXN0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom3Q9QXN0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom3Q9QXN0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom3Q9QXN0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shroom3Q9QXN0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.27■□□□□ 0.68
Shroom3Q9QXN0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shroom3Q9QXN0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shroom3Q9QXN0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shroom3Q9QXN0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Shroom3Q9QXN0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shroom3Q9QXN0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shroom3Q9QXN0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.26■□□□□ 0.67
Shroom3Q9QXN0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.26■□□□□ 0.67
Shroom3Q9QXN0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shroom3Q9QXN0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shroom3Q9QXN0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shroom3Q9QXN0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Shroom3Q9QXN0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Shroom3Q9QXN0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shroom3Q9QXN0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shroom3Q9QXN0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Shroom3Q9QXN0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Shroom3Q9QXN0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shroom3Q9QXN0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.26■□□□□ 0.67
Shroom3Q9QXN0 Gm42778-201ENSMUST00000199644 553 ntBASIC19.26■□□□□ 0.67
Shroom3Q9QXN0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shroom3Q9QXN0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shroom3Q9QXN0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.25■□□□□ 0.67
Shroom3Q9QXN0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shroom3Q9QXN0 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.25■□□□□ 0.67
Shroom3Q9QXN0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shroom3Q9QXN0 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.25■□□□□ 0.67
Shroom3Q9QXN0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shroom3Q9QXN0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.24■□□□□ 0.67
Shroom3Q9QXN0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shroom3Q9QXN0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Shroom3Q9QXN0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shroom3Q9QXN0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Shroom3Q9QXN0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Shroom3Q9QXN0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shroom3Q9QXN0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shroom3Q9QXN0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shroom3Q9QXN0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Shroom3Q9QXN0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.24■□□□□ 0.67
Shroom3Q9QXN0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shroom3Q9QXN0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shroom3Q9QXN0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shroom3Q9QXN0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shroom3Q9QXN0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.23■□□□□ 0.67
Shroom3Q9QXN0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shroom3Q9QXN0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Shroom3Q9QXN0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shroom3Q9QXN0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.23■□□□□ 0.67
Shroom3Q9QXN0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shroom3Q9QXN0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shroom3Q9QXN0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.22■□□□□ 0.67
Shroom3Q9QXN0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shroom3Q9QXN0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms