Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Msh5Q9QUM7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.45■□□□□ 0.7
Msh5Q9QUM7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh5Q9QUM7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh5Q9QUM7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Msh5Q9QUM7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Msh5Q9QUM7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh5Q9QUM7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Msh5Q9QUM7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Msh5Q9QUM7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Msh5Q9QUM7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh5Q9QUM7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh5Q9QUM7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh5Q9QUM7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh5Q9QUM7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh5Q9QUM7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh5Q9QUM7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh5Q9QUM7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh5Q9QUM7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh5Q9QUM7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.43■□□□□ 0.7
Msh5Q9QUM7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.43■□□□□ 0.7
Msh5Q9QUM7 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.43■□□□□ 0.7
Msh5Q9QUM7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh5Q9QUM7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh5Q9QUM7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Msh5Q9QUM7 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh5Q9QUM7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh5Q9QUM7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Msh5Q9QUM7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh5Q9QUM7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Msh5Q9QUM7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh5Q9QUM7 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.43■□□□□ 0.7
Msh5Q9QUM7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh5Q9QUM7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh5Q9QUM7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
Msh5Q9QUM7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh5Q9QUM7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh5Q9QUM7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Msh5Q9QUM7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh5Q9QUM7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.42■□□□□ 0.7
Msh5Q9QUM7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.42■□□□□ 0.7
Msh5Q9QUM7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh5Q9QUM7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Msh5Q9QUM7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Msh5Q9QUM7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Msh5Q9QUM7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Msh5Q9QUM7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msh5Q9QUM7 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.41■□□□□ 0.7
Msh5Q9QUM7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msh5Q9QUM7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msh5Q9QUM7 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.41■□□□□ 0.7
Msh5Q9QUM7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Msh5Q9QUM7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msh5Q9QUM7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Msh5Q9QUM7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Msh5Q9QUM7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Msh5Q9QUM7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Msh5Q9QUM7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.41■□□□□ 0.7
Msh5Q9QUM7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Msh5Q9QUM7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.41■□□□□ 0.7
Msh5Q9QUM7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Msh5Q9QUM7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh5Q9QUM7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Msh5Q9QUM7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Msh5Q9QUM7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Msh5Q9QUM7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Msh5Q9QUM7 Gm18558-201ENSMUST00000186253 1214 ntBASIC19.4■□□□□ 0.7
Msh5Q9QUM7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.4■□□□□ 0.7
Msh5Q9QUM7 Gm45417-201ENSMUST00000209533 758 ntBASIC19.4■□□□□ 0.7
Msh5Q9QUM7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh5Q9QUM7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh5Q9QUM7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh5Q9QUM7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh5Q9QUM7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh5Q9QUM7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh5Q9QUM7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Msh5Q9QUM7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Msh5Q9QUM7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Msh5Q9QUM7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh5Q9QUM7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh5Q9QUM7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh5Q9QUM7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh5Q9QUM7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.39■□□□□ 0.69
Msh5Q9QUM7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Msh5Q9QUM7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh5Q9QUM7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh5Q9QUM7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Msh5Q9QUM7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.39■□□□□ 0.69
Msh5Q9QUM7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Msh5Q9QUM7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Msh5Q9QUM7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.39■□□□□ 0.69
Msh5Q9QUM7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh5Q9QUM7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh5Q9QUM7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh5Q9QUM7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh5Q9QUM7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Msh5Q9QUM7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh5Q9QUM7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Msh5Q9QUM7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh5Q9QUM7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms