Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup50Q9JIH2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Nup50Q9JIH2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nup50Q9JIH2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup50Q9JIH2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup50Q9JIH2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup50Q9JIH2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup50Q9JIH2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup50Q9JIH2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nup50Q9JIH2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Nup50Q9JIH2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.31■□□□□ 0.84
Nup50Q9JIH2 Gm21956-201ENSMUST00000179946 522 ntBASIC20.31■□□□□ 0.84
Nup50Q9JIH2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nup50Q9JIH2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Nup50Q9JIH2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nup50Q9JIH2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Nup50Q9JIH2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nup50Q9JIH2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nup50Q9JIH2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nup50Q9JIH2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nup50Q9JIH2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nup50Q9JIH2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nup50Q9JIH2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nup50Q9JIH2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nup50Q9JIH2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nup50Q9JIH2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nup50Q9JIH2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Nup50Q9JIH2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Nup50Q9JIH2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nup50Q9JIH2 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.29■□□□□ 0.84
Nup50Q9JIH2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nup50Q9JIH2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nup50Q9JIH2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.28■□□□□ 0.84
Nup50Q9JIH2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nup50Q9JIH2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.28■□□□□ 0.84
Nup50Q9JIH2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.28■□□□□ 0.84
Nup50Q9JIH2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nup50Q9JIH2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nup50Q9JIH2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nup50Q9JIH2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nup50Q9JIH2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nup50Q9JIH2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nup50Q9JIH2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nup50Q9JIH2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Nup50Q9JIH2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nup50Q9JIH2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nup50Q9JIH2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Nup50Q9JIH2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nup50Q9JIH2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.27■□□□□ 0.84
Nup50Q9JIH2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nup50Q9JIH2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nup50Q9JIH2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.27■□□□□ 0.83
Nup50Q9JIH2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nup50Q9JIH2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nup50Q9JIH2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nup50Q9JIH2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.26■□□□□ 0.83
Nup50Q9JIH2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nup50Q9JIH2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.26■□□□□ 0.83
Nup50Q9JIH2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nup50Q9JIH2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nup50Q9JIH2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Nup50Q9JIH2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nup50Q9JIH2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nup50Q9JIH2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nup50Q9JIH2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nup50Q9JIH2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nup50Q9JIH2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nup50Q9JIH2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nup50Q9JIH2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Nup50Q9JIH2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
Nup50Q9JIH2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.25■□□□□ 0.83
Nup50Q9JIH2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Nup50Q9JIH2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Nup50Q9JIH2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Nup50Q9JIH2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nup50Q9JIH2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nup50Q9JIH2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nup50Q9JIH2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nup50Q9JIH2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nup50Q9JIH2 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.25■□□□□ 0.83
Nup50Q9JIH2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup50Q9JIH2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup50Q9JIH2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nup50Q9JIH2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup50Q9JIH2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Nup50Q9JIH2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup50Q9JIH2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Nup50Q9JIH2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup50Q9JIH2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup50Q9JIH2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.24■□□□□ 0.83
Nup50Q9JIH2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup50Q9JIH2 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.24■□□□□ 0.83
Nup50Q9JIH2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup50Q9JIH2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.24■□□□□ 0.83
Nup50Q9JIH2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup50Q9JIH2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Nup50Q9JIH2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nup50Q9JIH2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nup50Q9JIH2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nup50Q9JIH2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms