Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lima1Q9ERG0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Lima1Q9ERG0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Lima1Q9ERG0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Lima1Q9ERG0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lima1Q9ERG0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lima1Q9ERG0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Lima1Q9ERG0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lima1Q9ERG0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lima1Q9ERG0 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.9■□□□□ 0.62
Lima1Q9ERG0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lima1Q9ERG0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lima1Q9ERG0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lima1Q9ERG0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lima1Q9ERG0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lima1Q9ERG0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lima1Q9ERG0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
Lima1Q9ERG0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lima1Q9ERG0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.9■□□□□ 0.62
Lima1Q9ERG0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.9■□□□□ 0.62
Lima1Q9ERG0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lima1Q9ERG0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lima1Q9ERG0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lima1Q9ERG0 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.9■□□□□ 0.62
Lima1Q9ERG0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lima1Q9ERG0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lima1Q9ERG0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lima1Q9ERG0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lima1Q9ERG0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.89■□□□□ 0.61
Lima1Q9ERG0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.89■□□□□ 0.61
Lima1Q9ERG0 Mir6236-201ENSMUST00000184437 123 ntBASIC18.89■□□□□ 0.61
Lima1Q9ERG0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lima1Q9ERG0 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.89■□□□□ 0.61
Lima1Q9ERG0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lima1Q9ERG0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lima1Q9ERG0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lima1Q9ERG0 BC021767-201ENSMUST00000126387 1716 ntBASIC18.88■□□□□ 0.61
Lima1Q9ERG0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lima1Q9ERG0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.88■□□□□ 0.61
Lima1Q9ERG0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Lima1Q9ERG0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lima1Q9ERG0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lima1Q9ERG0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lima1Q9ERG0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.88■□□□□ 0.61
Lima1Q9ERG0 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.88■□□□□ 0.61
Lima1Q9ERG0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lima1Q9ERG0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lima1Q9ERG0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lima1Q9ERG0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lima1Q9ERG0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lima1Q9ERG0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lima1Q9ERG0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lima1Q9ERG0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lima1Q9ERG0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Lima1Q9ERG0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.87■□□□□ 0.61
Lima1Q9ERG0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lima1Q9ERG0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Lima1Q9ERG0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lima1Q9ERG0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lima1Q9ERG0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lima1Q9ERG0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lima1Q9ERG0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lima1Q9ERG0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Lima1Q9ERG0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.86■□□□□ 0.61
Lima1Q9ERG0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.86■□□□□ 0.61
Lima1Q9ERG0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lima1Q9ERG0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Lima1Q9ERG0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lima1Q9ERG0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lima1Q9ERG0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lima1Q9ERG0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lima1Q9ERG0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lima1Q9ERG0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.86■□□□□ 0.61
Lima1Q9ERG0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lima1Q9ERG0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lima1Q9ERG0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Lima1Q9ERG0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lima1Q9ERG0 Gm12922-201ENSMUST00000120626 809 ntBASIC18.85■□□□□ 0.61
Lima1Q9ERG0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.85■□□□□ 0.61
Lima1Q9ERG0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lima1Q9ERG0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lima1Q9ERG0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lima1Q9ERG0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
Lima1Q9ERG0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lima1Q9ERG0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lima1Q9ERG0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lima1Q9ERG0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lima1Q9ERG0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Lima1Q9ERG0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lima1Q9ERG0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lima1Q9ERG0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lima1Q9ERG0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Lima1Q9ERG0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lima1Q9ERG0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Lima1Q9ERG0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.84■□□□□ 0.61
Lima1Q9ERG0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lima1Q9ERG0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.84■□□□□ 0.61
Lima1Q9ERG0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lima1Q9ERG0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Lima1Q9ERG0 Grk6-206ENSMUST00000224995 2971 ntBASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 356.1 ms