Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf6Q9DBU5 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf6Q9DBU5 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf6Q9DBU5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Rnf6Q9DBU5 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.62■□□□□ 0.89
Rnf6Q9DBU5 Gm43060-201ENSMUST00000200621 289 ntBASIC20.62■□□□□ 0.89
Rnf6Q9DBU5 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.62■□□□□ 0.89
Rnf6Q9DBU5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf6Q9DBU5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf6Q9DBU5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Rnf6Q9DBU5 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf6Q9DBU5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Rnf6Q9DBU5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Rnf6Q9DBU5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Rnf6Q9DBU5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf6Q9DBU5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf6Q9DBU5 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf6Q9DBU5 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.61■□□□□ 0.89
Rnf6Q9DBU5 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf6Q9DBU5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.61■□□□□ 0.89
Rnf6Q9DBU5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf6Q9DBU5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf6Q9DBU5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf6Q9DBU5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf6Q9DBU5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rnf6Q9DBU5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rnf6Q9DBU5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf6Q9DBU5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rnf6Q9DBU5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Rnf6Q9DBU5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf6Q9DBU5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf6Q9DBU5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf6Q9DBU5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf6Q9DBU5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Rnf6Q9DBU5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf6Q9DBU5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf6Q9DBU5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf6Q9DBU5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf6Q9DBU5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.59■□□□□ 0.89
Rnf6Q9DBU5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rnf6Q9DBU5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rnf6Q9DBU5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Rnf6Q9DBU5 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Rnf6Q9DBU5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rnf6Q9DBU5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf6Q9DBU5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf6Q9DBU5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf6Q9DBU5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf6Q9DBU5 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf6Q9DBU5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf6Q9DBU5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Rnf6Q9DBU5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf6Q9DBU5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Rnf6Q9DBU5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.58■□□□□ 0.89
Rnf6Q9DBU5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
Rnf6Q9DBU5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf6Q9DBU5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf6Q9DBU5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.58■□□□□ 0.89
Rnf6Q9DBU5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf6Q9DBU5 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.58■□□□□ 0.89
Rnf6Q9DBU5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rnf6Q9DBU5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rnf6Q9DBU5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf6Q9DBU5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rnf6Q9DBU5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf6Q9DBU5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Rnf6Q9DBU5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf6Q9DBU5 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.57■□□□□ 0.88
Rnf6Q9DBU5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf6Q9DBU5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf6Q9DBU5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Rnf6Q9DBU5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.57■□□□□ 0.88
Rnf6Q9DBU5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf6Q9DBU5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf6Q9DBU5 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.56■□□□□ 0.88
Rnf6Q9DBU5 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf6Q9DBU5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rnf6Q9DBU5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.56■□□□□ 0.88
Rnf6Q9DBU5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Rnf6Q9DBU5 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.56■□□□□ 0.88
Rnf6Q9DBU5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rnf6Q9DBU5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Rnf6Q9DBU5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf6Q9DBU5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf6Q9DBU5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf6Q9DBU5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf6Q9DBU5 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rnf6Q9DBU5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf6Q9DBU5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf6Q9DBU5 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf6Q9DBU5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf6Q9DBU5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf6Q9DBU5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf6Q9DBU5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.54■□□□□ 0.88
Rnf6Q9DBU5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf6Q9DBU5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf6Q9DBU5 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.54■□□□□ 0.88
Rnf6Q9DBU5 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf6Q9DBU5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rnf6Q9DBU5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms