Protein–RNA interactions for Protein: Q9D9P8

Llcfc1, LLLL and CFNLAS motif-containing protein 1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Llcfc1Q9D9P8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Llcfc1Q9D9P8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Llcfc1Q9D9P8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Llcfc1Q9D9P8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Llcfc1Q9D9P8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Llcfc1Q9D9P8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Llcfc1Q9D9P8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Llcfc1Q9D9P8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Llcfc1Q9D9P8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Llcfc1Q9D9P8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Llcfc1Q9D9P8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Llcfc1Q9D9P8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Llcfc1Q9D9P8 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.21■□□□□ 0.83
Llcfc1Q9D9P8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Llcfc1Q9D9P8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Llcfc1Q9D9P8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.21■□□□□ 0.83
Llcfc1Q9D9P8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Llcfc1Q9D9P8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Llcfc1Q9D9P8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Llcfc1Q9D9P8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Llcfc1Q9D9P8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Llcfc1Q9D9P8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Llcfc1Q9D9P8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Llcfc1Q9D9P8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Llcfc1Q9D9P8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Llcfc1Q9D9P8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.19■□□□□ 0.82
Llcfc1Q9D9P8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Llcfc1Q9D9P8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.19■□□□□ 0.82
Llcfc1Q9D9P8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Llcfc1Q9D9P8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Llcfc1Q9D9P8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Llcfc1Q9D9P8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.19■□□□□ 0.82
Llcfc1Q9D9P8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.19■□□□□ 0.82
Llcfc1Q9D9P8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Llcfc1Q9D9P8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Llcfc1Q9D9P8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Llcfc1Q9D9P8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.18■□□□□ 0.82
Llcfc1Q9D9P8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Llcfc1Q9D9P8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Llcfc1Q9D9P8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Llcfc1Q9D9P8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Llcfc1Q9D9P8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Llcfc1Q9D9P8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Llcfc1Q9D9P8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Llcfc1Q9D9P8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Llcfc1Q9D9P8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Llcfc1Q9D9P8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Llcfc1Q9D9P8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Llcfc1Q9D9P8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.17■□□□□ 0.82
Llcfc1Q9D9P8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Llcfc1Q9D9P8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Llcfc1Q9D9P8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Llcfc1Q9D9P8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Llcfc1Q9D9P8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Llcfc1Q9D9P8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Llcfc1Q9D9P8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Llcfc1Q9D9P8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Llcfc1Q9D9P8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Llcfc1Q9D9P8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Llcfc1Q9D9P8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Llcfc1Q9D9P8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Llcfc1Q9D9P8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Llcfc1Q9D9P8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.16■□□□□ 0.82
Llcfc1Q9D9P8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Llcfc1Q9D9P8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
Llcfc1Q9D9P8 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.16■□□□□ 0.82
Llcfc1Q9D9P8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Llcfc1Q9D9P8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.16■□□□□ 0.82
Llcfc1Q9D9P8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Llcfc1Q9D9P8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Llcfc1Q9D9P8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Llcfc1Q9D9P8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Llcfc1Q9D9P8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Llcfc1Q9D9P8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
Llcfc1Q9D9P8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Llcfc1Q9D9P8 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.15■□□□□ 0.82
Llcfc1Q9D9P8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Llcfc1Q9D9P8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Llcfc1Q9D9P8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Llcfc1Q9D9P8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Llcfc1Q9D9P8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Llcfc1Q9D9P8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.14■□□□□ 0.81
Llcfc1Q9D9P8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.14■□□□□ 0.81
Llcfc1Q9D9P8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Llcfc1Q9D9P8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Llcfc1Q9D9P8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Llcfc1Q9D9P8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Llcfc1Q9D9P8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Llcfc1Q9D9P8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Llcfc1Q9D9P8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Llcfc1Q9D9P8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Llcfc1Q9D9P8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Llcfc1Q9D9P8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.13■□□□□ 0.81
Llcfc1Q9D9P8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.13■□□□□ 0.81
Llcfc1Q9D9P8 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.13■□□□□ 0.81
Llcfc1Q9D9P8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Llcfc1Q9D9P8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.13■□□□□ 0.81
Llcfc1Q9D9P8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Llcfc1Q9D9P8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Llcfc1Q9D9P8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms