Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm7Q9CQQ8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm7Q9CQQ8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Lsm7Q9CQQ8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
Lsm7Q9CQQ8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.43■□□□□ 0.7
Lsm7Q9CQQ8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm7Q9CQQ8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.42■□□□□ 0.7
Lsm7Q9CQQ8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Lsm7Q9CQQ8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Lsm7Q9CQQ8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm7Q9CQQ8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm7Q9CQQ8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm7Q9CQQ8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm7Q9CQQ8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm7Q9CQQ8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm7Q9CQQ8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm7Q9CQQ8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.42■□□□□ 0.7
Lsm7Q9CQQ8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Lsm7Q9CQQ8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm7Q9CQQ8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm7Q9CQQ8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.42■□□□□ 0.7
Lsm7Q9CQQ8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm7Q9CQQ8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm7Q9CQQ8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.41■□□□□ 0.7
Lsm7Q9CQQ8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm7Q9CQQ8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Lsm7Q9CQQ8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm7Q9CQQ8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm7Q9CQQ8 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.41■□□□□ 0.7
Lsm7Q9CQQ8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm7Q9CQQ8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm7Q9CQQ8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Lsm7Q9CQQ8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm7Q9CQQ8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm7Q9CQQ8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Lsm7Q9CQQ8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lsm7Q9CQQ8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Lsm7Q9CQQ8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lsm7Q9CQQ8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm7Q9CQQ8 Gm13146-201ENSMUST00000118508 780 ntBASIC19.39■□□□□ 0.69
Lsm7Q9CQQ8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm7Q9CQQ8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm7Q9CQQ8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm7Q9CQQ8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm7Q9CQQ8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm7Q9CQQ8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm7Q9CQQ8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lsm7Q9CQQ8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Lsm7Q9CQQ8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lsm7Q9CQQ8 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.38■□□□□ 0.69
Lsm7Q9CQQ8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.38■□□□□ 0.69
Lsm7Q9CQQ8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lsm7Q9CQQ8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Lsm7Q9CQQ8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Lsm7Q9CQQ8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lsm7Q9CQQ8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm7Q9CQQ8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm7Q9CQQ8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm7Q9CQQ8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm7Q9CQQ8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm7Q9CQQ8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Lsm7Q9CQQ8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm7Q9CQQ8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.37■□□□□ 0.69
Lsm7Q9CQQ8 Gm7860-201ENSMUST00000121190 879 ntBASIC19.37■□□□□ 0.69
Lsm7Q9CQQ8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm7Q9CQQ8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm7Q9CQQ8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm7Q9CQQ8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm7Q9CQQ8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm7Q9CQQ8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm7Q9CQQ8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Lsm7Q9CQQ8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.36■□□□□ 0.69
Lsm7Q9CQQ8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.36■□□□□ 0.69
Lsm7Q9CQQ8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.36■□□□□ 0.69
Lsm7Q9CQQ8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm7Q9CQQ8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm7Q9CQQ8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm7Q9CQQ8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm7Q9CQQ8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm7Q9CQQ8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm7Q9CQQ8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm7Q9CQQ8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm7Q9CQQ8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm7Q9CQQ8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm7Q9CQQ8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Lsm7Q9CQQ8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Lsm7Q9CQQ8 Gm10602-201ENSMUST00000098239 609 ntBASIC19.35■□□□□ 0.69
Lsm7Q9CQQ8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm7Q9CQQ8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm7Q9CQQ8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm7Q9CQQ8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Lsm7Q9CQQ8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.34■□□□□ 0.69
Lsm7Q9CQQ8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm7Q9CQQ8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm7Q9CQQ8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm7Q9CQQ8 Gm12933-201ENSMUST00000120203 872 ntBASIC19.34■□□□□ 0.69
Lsm7Q9CQQ8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm7Q9CQQ8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm7Q9CQQ8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm7Q9CQQ8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms