Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tlr3Q99MB1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tlr3Q99MB1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.59■□□□□ 0.89
Tlr3Q99MB1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tlr3Q99MB1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Tlr3Q99MB1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Tlr3Q99MB1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Tlr3Q99MB1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tlr3Q99MB1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tlr3Q99MB1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tlr3Q99MB1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Tlr3Q99MB1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Tlr3Q99MB1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.58■□□□□ 0.89
Tlr3Q99MB1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tlr3Q99MB1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tlr3Q99MB1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Tlr3Q99MB1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tlr3Q99MB1 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.58■□□□□ 0.89
Tlr3Q99MB1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tlr3Q99MB1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tlr3Q99MB1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tlr3Q99MB1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tlr3Q99MB1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tlr3Q99MB1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tlr3Q99MB1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tlr3Q99MB1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tlr3Q99MB1 Gm27801-201ENSMUST00000184174 223 ntBASIC20.57■□□□□ 0.88
Tlr3Q99MB1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tlr3Q99MB1 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.57■□□□□ 0.88
Tlr3Q99MB1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tlr3Q99MB1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tlr3Q99MB1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tlr3Q99MB1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tlr3Q99MB1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.57■□□□□ 0.88
Tlr3Q99MB1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.57■□□□□ 0.88
Tlr3Q99MB1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tlr3Q99MB1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tlr3Q99MB1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tlr3Q99MB1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tlr3Q99MB1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tlr3Q99MB1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.56■□□□□ 0.88
Tlr3Q99MB1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tlr3Q99MB1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tlr3Q99MB1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Tlr3Q99MB1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
Tlr3Q99MB1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tlr3Q99MB1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tlr3Q99MB1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tlr3Q99MB1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tlr3Q99MB1 Gm43060-201ENSMUST00000200621 289 ntBASIC20.55■□□□□ 0.88
Tlr3Q99MB1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.55■□□□□ 0.88
Tlr3Q99MB1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tlr3Q99MB1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tlr3Q99MB1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tlr3Q99MB1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tlr3Q99MB1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Tlr3Q99MB1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tlr3Q99MB1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tlr3Q99MB1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tlr3Q99MB1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tlr3Q99MB1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Tlr3Q99MB1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
Tlr3Q99MB1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Tlr3Q99MB1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tlr3Q99MB1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Tlr3Q99MB1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tlr3Q99MB1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Tlr3Q99MB1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.54■□□□□ 0.88
Tlr3Q99MB1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tlr3Q99MB1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
Tlr3Q99MB1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Tlr3Q99MB1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tlr3Q99MB1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tlr3Q99MB1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tlr3Q99MB1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Tlr3Q99MB1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tlr3Q99MB1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.53■□□□□ 0.88
Tlr3Q99MB1 Gm7291-201ENSMUST00000199147 382 ntBASIC20.53■□□□□ 0.88
Tlr3Q99MB1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tlr3Q99MB1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tlr3Q99MB1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tlr3Q99MB1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tlr3Q99MB1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tlr3Q99MB1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tlr3Q99MB1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tlr3Q99MB1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tlr3Q99MB1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tlr3Q99MB1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tlr3Q99MB1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tlr3Q99MB1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tlr3Q99MB1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Tlr3Q99MB1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Tlr3Q99MB1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tlr3Q99MB1 Gm10493-201ENSMUST00000097270 612 ntBASIC20.52■□□□□ 0.88
Tlr3Q99MB1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tlr3Q99MB1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tlr3Q99MB1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tlr3Q99MB1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tlr3Q99MB1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tlr3Q99MB1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms