Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Cstf1Q99LC2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cstf1Q99LC2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cstf1Q99LC2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cstf1Q99LC2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cstf1Q99LC2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cstf1Q99LC2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cstf1Q99LC2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.17■□□□□ 0.66
Cstf1Q99LC2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cstf1Q99LC2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cstf1Q99LC2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cstf1Q99LC2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cstf1Q99LC2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cstf1Q99LC2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Cstf1Q99LC2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cstf1Q99LC2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cstf1Q99LC2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.16■□□□□ 0.66
Cstf1Q99LC2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.16■□□□□ 0.66
Cstf1Q99LC2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cstf1Q99LC2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cstf1Q99LC2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cstf1Q99LC2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cstf1Q99LC2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cstf1Q99LC2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.16■□□□□ 0.66
Cstf1Q99LC2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cstf1Q99LC2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cstf1Q99LC2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cstf1Q99LC2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cstf1Q99LC2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cstf1Q99LC2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cstf1Q99LC2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cstf1Q99LC2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cstf1Q99LC2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cstf1Q99LC2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cstf1Q99LC2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cstf1Q99LC2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cstf1Q99LC2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.14■□□□□ 0.65
Cstf1Q99LC2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cstf1Q99LC2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cstf1Q99LC2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cstf1Q99LC2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.14■□□□□ 0.65
Cstf1Q99LC2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cstf1Q99LC2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.14■□□□□ 0.65
Cstf1Q99LC2 Rab3c-203ENSMUST00000224180 967 ntBASIC19.14■□□□□ 0.65
Cstf1Q99LC2 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.14■□□□□ 0.65
Cstf1Q99LC2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cstf1Q99LC2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cstf1Q99LC2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cstf1Q99LC2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cstf1Q99LC2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cstf1Q99LC2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cstf1Q99LC2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Cstf1Q99LC2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cstf1Q99LC2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.13■□□□□ 0.65
Cstf1Q99LC2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cstf1Q99LC2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cstf1Q99LC2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cstf1Q99LC2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cstf1Q99LC2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cstf1Q99LC2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cstf1Q99LC2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
Cstf1Q99LC2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cstf1Q99LC2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cstf1Q99LC2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cstf1Q99LC2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cstf1Q99LC2 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.12■□□□□ 0.65
Cstf1Q99LC2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cstf1Q99LC2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cstf1Q99LC2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Cstf1Q99LC2 Gm6576-201ENSMUST00000169678 883 ntBASIC19.12■□□□□ 0.65
Cstf1Q99LC2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.12■□□□□ 0.65
Cstf1Q99LC2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Cstf1Q99LC2 Gm27275-201ENSMUST00000184318 272 ntBASIC19.12■□□□□ 0.65
Cstf1Q99LC2 Gm26524-201ENSMUST00000192339 390 ntBASIC19.12■□□□□ 0.65
Cstf1Q99LC2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cstf1Q99LC2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cstf1Q99LC2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cstf1Q99LC2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cstf1Q99LC2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cstf1Q99LC2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cstf1Q99LC2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cstf1Q99LC2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cstf1Q99LC2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cstf1Q99LC2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Cstf1Q99LC2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cstf1Q99LC2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cstf1Q99LC2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cstf1Q99LC2 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.1■□□□□ 0.65
Cstf1Q99LC2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cstf1Q99LC2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cstf1Q99LC2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cstf1Q99LC2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cstf1Q99LC2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cstf1Q99LC2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cstf1Q99LC2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cstf1Q99LC2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cstf1Q99LC2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cstf1Q99LC2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cstf1Q99LC2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cstf1Q99LC2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms