Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rfc4Q99J62 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Rfc4Q99J62 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
Rfc4Q99J62 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rfc4Q99J62 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rfc4Q99J62 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rfc4Q99J62 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rfc4Q99J62 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rfc4Q99J62 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rfc4Q99J62 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rfc4Q99J62 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rfc4Q99J62 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Rfc4Q99J62 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rfc4Q99J62 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rfc4Q99J62 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rfc4Q99J62 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.21■■□□□ 1.15
Rfc4Q99J62 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC22.21■■□□□ 1.15
Rfc4Q99J62 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rfc4Q99J62 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rfc4Q99J62 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rfc4Q99J62 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Rfc4Q99J62 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rfc4Q99J62 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC22.21■■□□□ 1.15
Rfc4Q99J62 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rfc4Q99J62 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.15
Rfc4Q99J62 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Rfc4Q99J62 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rfc4Q99J62 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rfc4Q99J62 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rfc4Q99J62 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC22.2■■□□□ 1.14
Rfc4Q99J62 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rfc4Q99J62 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rfc4Q99J62 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.2■■□□□ 1.14
Rfc4Q99J62 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rfc4Q99J62 Cdkn3-203ENSMUST00000227149 1952 ntBASIC22.19■■□□□ 1.14
Rfc4Q99J62 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Rfc4Q99J62 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rfc4Q99J62 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rfc4Q99J62 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC22.19■■□□□ 1.14
Rfc4Q99J62 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rfc4Q99J62 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rfc4Q99J62 Trmt13-210ENSMUST00000198454 880 ntBASIC22.19■■□□□ 1.14
Rfc4Q99J62 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rfc4Q99J62 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.19■■□□□ 1.14
Rfc4Q99J62 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.19■■□□□ 1.14
Rfc4Q99J62 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rfc4Q99J62 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC22.19■■□□□ 1.14
Rfc4Q99J62 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
Rfc4Q99J62 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Rfc4Q99J62 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rfc4Q99J62 Gm37035-201ENSMUST00000194809 2148 ntBASIC22.18■■□□□ 1.14
Rfc4Q99J62 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rfc4Q99J62 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22.18■■□□□ 1.14
Rfc4Q99J62 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rfc4Q99J62 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rfc4Q99J62 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC22.18■■□□□ 1.14
Rfc4Q99J62 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rfc4Q99J62 AC152827.1-201ENSMUST00000221143 2189 ntBASIC22.18■■□□□ 1.14
Rfc4Q99J62 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rfc4Q99J62 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rfc4Q99J62 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rfc4Q99J62 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Rfc4Q99J62 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rfc4Q99J62 Gm44878-201ENSMUST00000205812 1295 ntBASIC22.17■■□□□ 1.14
Rfc4Q99J62 Gm44672-201ENSMUST00000206944 1098 ntBASIC22.17■■□□□ 1.14
Rfc4Q99J62 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rfc4Q99J62 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.17■■□□□ 1.14
Rfc4Q99J62 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Rfc4Q99J62 Hsf1-207ENSMUST00000228371 2102 ntBASIC22.16■■□□□ 1.14
Rfc4Q99J62 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Rfc4Q99J62 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rfc4Q99J62 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Rfc4Q99J62 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rfc4Q99J62 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC22.16■■□□□ 1.14
Rfc4Q99J62 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rfc4Q99J62 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rfc4Q99J62 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rfc4Q99J62 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rfc4Q99J62 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rfc4Q99J62 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rfc4Q99J62 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rfc4Q99J62 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
Rfc4Q99J62 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Rfc4Q99J62 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rfc4Q99J62 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Rfc4Q99J62 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Rfc4Q99J62 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC22.14■■□□□ 1.14
Rfc4Q99J62 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC22.14■■□□□ 1.13
Rfc4Q99J62 Mir7071-201ENSMUST00000184847 69 ntBASIC22.14■■□□□ 1.13
Rfc4Q99J62 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rfc4Q99J62 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rfc4Q99J62 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rfc4Q99J62 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rfc4Q99J62 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rfc4Q99J62 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rfc4Q99J62 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rfc4Q99J62 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC22.13■■□□□ 1.13
Rfc4Q99J62 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rfc4Q99J62 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC22.13■■□□□ 1.13
Rfc4Q99J62 Gm26524-201ENSMUST00000192339 390 ntBASIC22.13■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms