Protein–RNA interactions for Protein: Q8VCD7

Kdm4c, Lysine-specific demethylase 4C, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm4cQ8VCD7 Gm5953-201ENSMUST00000220644 2616 ntBASIC22.68■■□□□ 1.22
Kdm4cQ8VCD7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Kdm4cQ8VCD7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Kdm4cQ8VCD7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
Kdm4cQ8VCD7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Kdm4cQ8VCD7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC22.67■■□□□ 1.22
Kdm4cQ8VCD7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Kdm4cQ8VCD7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Kdm4cQ8VCD7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Kdm4cQ8VCD7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.67■■□□□ 1.22
Kdm4cQ8VCD7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Kdm4cQ8VCD7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Kdm4cQ8VCD7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Kdm4cQ8VCD7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Kdm4cQ8VCD7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Kdm4cQ8VCD7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Kdm4cQ8VCD7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Kdm4cQ8VCD7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
Kdm4cQ8VCD7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Kdm4cQ8VCD7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Kdm4cQ8VCD7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Kdm4cQ8VCD7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Kdm4cQ8VCD7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
Kdm4cQ8VCD7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Kdm4cQ8VCD7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Kdm4cQ8VCD7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Kdm4cQ8VCD7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Kdm4cQ8VCD7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm4cQ8VCD7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm4cQ8VCD7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm4cQ8VCD7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Kdm4cQ8VCD7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm4cQ8VCD7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm4cQ8VCD7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm4cQ8VCD7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm4cQ8VCD7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm4cQ8VCD7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm4cQ8VCD7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm4cQ8VCD7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Kdm4cQ8VCD7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Kdm4cQ8VCD7 Grk6-206ENSMUST00000224995 2971 ntBASIC22.65■■□□□ 1.22
Kdm4cQ8VCD7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Kdm4cQ8VCD7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Kdm4cQ8VCD7 Gm5540-201ENSMUST00000131852 1848 ntBASIC22.64■■□□□ 1.22
Kdm4cQ8VCD7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Kdm4cQ8VCD7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Kdm4cQ8VCD7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Kdm4cQ8VCD7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC22.64■■□□□ 1.21
Kdm4cQ8VCD7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC22.64■■□□□ 1.21
Kdm4cQ8VCD7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Kdm4cQ8VCD7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Kdm4cQ8VCD7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Kdm4cQ8VCD7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Kdm4cQ8VCD7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Kdm4cQ8VCD7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Kdm4cQ8VCD7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Kdm4cQ8VCD7 Gm43182-201ENSMUST00000199476 2528 ntBASIC22.63■■□□□ 1.21
Kdm4cQ8VCD7 Gm9959-201ENSMUST00000068277 390 ntBASIC22.63■■□□□ 1.21
Kdm4cQ8VCD7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Kdm4cQ8VCD7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Kdm4cQ8VCD7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Kdm4cQ8VCD7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Kdm4cQ8VCD7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC22.63■■□□□ 1.21
Kdm4cQ8VCD7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC22.63■■□□□ 1.21
Kdm4cQ8VCD7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Kdm4cQ8VCD7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Kdm4cQ8VCD7 Dmtn-210ENSMUST00000228824 2377 ntBASIC22.62■■□□□ 1.21
Kdm4cQ8VCD7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Kdm4cQ8VCD7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Kdm4cQ8VCD7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.62■■□□□ 1.21
Kdm4cQ8VCD7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.62■■□□□ 1.21
Kdm4cQ8VCD7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.62■■□□□ 1.21
Kdm4cQ8VCD7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Kdm4cQ8VCD7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Kdm4cQ8VCD7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Kdm4cQ8VCD7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Kdm4cQ8VCD7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Kdm4cQ8VCD7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Kdm4cQ8VCD7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Kdm4cQ8VCD7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Kdm4cQ8VCD7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Kdm4cQ8VCD7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Kdm4cQ8VCD7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Kdm4cQ8VCD7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.61■■□□□ 1.21
Kdm4cQ8VCD7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Kdm4cQ8VCD7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Kdm4cQ8VCD7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Kdm4cQ8VCD7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Kdm4cQ8VCD7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm4cQ8VCD7 Gm15853-202ENSMUST00000195518 2041 ntBASIC22.6■■□□□ 1.21
Kdm4cQ8VCD7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm4cQ8VCD7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm4cQ8VCD7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm4cQ8VCD7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm4cQ8VCD7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm4cQ8VCD7 Gm15546-201ENSMUST00000122095 826 ntBASIC22.6■■□□□ 1.21
Kdm4cQ8VCD7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Kdm4cQ8VCD7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm4cQ8VCD7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Kdm4cQ8VCD7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms