Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cdt1Q8R4E9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cdt1Q8R4E9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdt1Q8R4E9 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.58■□□□□ 0.56
Cdt1Q8R4E9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Cdt1Q8R4E9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.58■□□□□ 0.56
Cdt1Q8R4E9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdt1Q8R4E9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Cdt1Q8R4E9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdt1Q8R4E9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.57■□□□□ 0.56
Cdt1Q8R4E9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdt1Q8R4E9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cdt1Q8R4E9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdt1Q8R4E9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.57■□□□□ 0.56
Cdt1Q8R4E9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdt1Q8R4E9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdt1Q8R4E9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdt1Q8R4E9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Cdt1Q8R4E9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdt1Q8R4E9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdt1Q8R4E9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdt1Q8R4E9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cdt1Q8R4E9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdt1Q8R4E9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdt1Q8R4E9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Cdt1Q8R4E9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.55■□□□□ 0.56
Cdt1Q8R4E9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.55■□□□□ 0.56
Cdt1Q8R4E9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdt1Q8R4E9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdt1Q8R4E9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdt1Q8R4E9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdt1Q8R4E9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cdt1Q8R4E9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdt1Q8R4E9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdt1Q8R4E9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cdt1Q8R4E9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdt1Q8R4E9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdt1Q8R4E9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.54■□□□□ 0.56
Cdt1Q8R4E9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdt1Q8R4E9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdt1Q8R4E9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdt1Q8R4E9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdt1Q8R4E9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cdt1Q8R4E9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdt1Q8R4E9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdt1Q8R4E9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdt1Q8R4E9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cdt1Q8R4E9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdt1Q8R4E9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdt1Q8R4E9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdt1Q8R4E9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdt1Q8R4E9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdt1Q8R4E9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
Cdt1Q8R4E9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdt1Q8R4E9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdt1Q8R4E9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdt1Q8R4E9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdt1Q8R4E9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdt1Q8R4E9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdt1Q8R4E9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdt1Q8R4E9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdt1Q8R4E9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.52■□□□□ 0.56
Cdt1Q8R4E9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cdt1Q8R4E9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdt1Q8R4E9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.52■□□□□ 0.55
Cdt1Q8R4E9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdt1Q8R4E9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdt1Q8R4E9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cdt1Q8R4E9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdt1Q8R4E9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.51■□□□□ 0.55
Cdt1Q8R4E9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.51■□□□□ 0.55
Cdt1Q8R4E9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdt1Q8R4E9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdt1Q8R4E9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdt1Q8R4E9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdt1Q8R4E9 Gm11421-201ENSMUST00000122124 294 ntBASIC18.5■□□□□ 0.55
Cdt1Q8R4E9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.5■□□□□ 0.55
Cdt1Q8R4E9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdt1Q8R4E9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Cdt1Q8R4E9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cdt1Q8R4E9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdt1Q8R4E9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cdt1Q8R4E9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.49■□□□□ 0.55
Cdt1Q8R4E9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdt1Q8R4E9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdt1Q8R4E9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdt1Q8R4E9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Cdt1Q8R4E9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.49■□□□□ 0.55
Cdt1Q8R4E9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdt1Q8R4E9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdt1Q8R4E9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Cdt1Q8R4E9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdt1Q8R4E9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdt1Q8R4E9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdt1Q8R4E9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdt1Q8R4E9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdt1Q8R4E9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdt1Q8R4E9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cdt1Q8R4E9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.48■□□□□ 0.55
Cdt1Q8R4E9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms