Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Atp2a1Q8R429 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Atp2a1Q8R429 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Atp2a1Q8R429 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Atp2a1Q8R429 Gm38205-201ENSMUST00000192243 258 ntBASIC21.49■■□□□ 1.03
Atp2a1Q8R429 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atp2a1Q8R429 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.49■■□□□ 1.03
Atp2a1Q8R429 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Atp2a1Q8R429 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atp2a1Q8R429 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.49■■□□□ 1.03
Atp2a1Q8R429 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Atp2a1Q8R429 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atp2a1Q8R429 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atp2a1Q8R429 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atp2a1Q8R429 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atp2a1Q8R429 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.48■■□□□ 1.03
Atp2a1Q8R429 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.48■■□□□ 1.03
Atp2a1Q8R429 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atp2a1Q8R429 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atp2a1Q8R429 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atp2a1Q8R429 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atp2a1Q8R429 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atp2a1Q8R429 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atp2a1Q8R429 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atp2a1Q8R429 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Atp2a1Q8R429 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.47■■□□□ 1.03
Atp2a1Q8R429 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atp2a1Q8R429 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atp2a1Q8R429 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Atp2a1Q8R429 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.46■■□□□ 1.03
Atp2a1Q8R429 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Atp2a1Q8R429 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Atp2a1Q8R429 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.46■■□□□ 1.03
Atp2a1Q8R429 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Atp2a1Q8R429 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Atp2a1Q8R429 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Atp2a1Q8R429 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Atp2a1Q8R429 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atp2a1Q8R429 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atp2a1Q8R429 Gm27011-201ENSMUST00000182352 972 ntBASIC21.45■■□□□ 1.02
Atp2a1Q8R429 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atp2a1Q8R429 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atp2a1Q8R429 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atp2a1Q8R429 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Atp2a1Q8R429 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atp2a1Q8R429 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atp2a1Q8R429 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.44■■□□□ 1.02
Atp2a1Q8R429 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atp2a1Q8R429 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atp2a1Q8R429 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Atp2a1Q8R429 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.44■■□□□ 1.02
Atp2a1Q8R429 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.44■■□□□ 1.02
Atp2a1Q8R429 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atp2a1Q8R429 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atp2a1Q8R429 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atp2a1Q8R429 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Atp2a1Q8R429 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.44■■□□□ 1.02
Atp2a1Q8R429 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.44■■□□□ 1.02
Atp2a1Q8R429 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atp2a1Q8R429 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atp2a1Q8R429 Gm13534-201ENSMUST00000121169 513 ntBASIC21.43■■□□□ 1.02
Atp2a1Q8R429 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Atp2a1Q8R429 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.43■■□□□ 1.02
Atp2a1Q8R429 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Atp2a1Q8R429 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.43■■□□□ 1.02
Atp2a1Q8R429 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atp2a1Q8R429 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atp2a1Q8R429 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atp2a1Q8R429 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atp2a1Q8R429 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Atp2a1Q8R429 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Atp2a1Q8R429 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Atp2a1Q8R429 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atp2a1Q8R429 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atp2a1Q8R429 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Atp2a1Q8R429 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Atp2a1Q8R429 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.42■■□□□ 1.02
Atp2a1Q8R429 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atp2a1Q8R429 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atp2a1Q8R429 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atp2a1Q8R429 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atp2a1Q8R429 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Atp2a1Q8R429 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atp2a1Q8R429 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atp2a1Q8R429 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atp2a1Q8R429 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atp2a1Q8R429 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Atp2a1Q8R429 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atp2a1Q8R429 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atp2a1Q8R429 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.41■■□□□ 1.02
Atp2a1Q8R429 Mir5133-201ENSMUST00000174955 77 ntBASIC21.41■■□□□ 1.02
Atp2a1Q8R429 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.41■■□□□ 1.02
Atp2a1Q8R429 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
Atp2a1Q8R429 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atp2a1Q8R429 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atp2a1Q8R429 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atp2a1Q8R429 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atp2a1Q8R429 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atp2a1Q8R429 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Atp2a1Q8R429 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms