Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC24.7■■□□□ 1.54
Chmp7Q8R1T1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC24.7■■□□□ 1.54
Chmp7Q8R1T1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Chmp7Q8R1T1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Chmp7Q8R1T1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
Chmp7Q8R1T1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Chmp7Q8R1T1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Chmp7Q8R1T1 Gm27032-201ENSMUST00000183124 1116 ntBASIC24.68■■□□□ 1.54
Chmp7Q8R1T1 Gm8520-201ENSMUST00000186517 868 ntBASIC24.68■■□□□ 1.54
Chmp7Q8R1T1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC24.68■■□□□ 1.54
Chmp7Q8R1T1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Chmp7Q8R1T1 Gm20049-201ENSMUST00000219950 730 ntBASIC24.68■■□□□ 1.54
Chmp7Q8R1T1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC24.68■■□□□ 1.54
Chmp7Q8R1T1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Chmp7Q8R1T1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Chmp7Q8R1T1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC24.68■■□□□ 1.54
Chmp7Q8R1T1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Chmp7Q8R1T1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC24.67■■□□□ 1.54
Chmp7Q8R1T1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Chmp7Q8R1T1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC24.67■■□□□ 1.54
Chmp7Q8R1T1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Chmp7Q8R1T1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Chmp7Q8R1T1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
Chmp7Q8R1T1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Chmp7Q8R1T1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
Chmp7Q8R1T1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Chmp7Q8R1T1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC24.66■■□□□ 1.54
Chmp7Q8R1T1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Chmp7Q8R1T1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Chmp7Q8R1T1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC24.66■■□□□ 1.54
Chmp7Q8R1T1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Chmp7Q8R1T1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
Chmp7Q8R1T1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.66■■□□□ 1.54
Chmp7Q8R1T1 AC122769.4-201ENSMUST00000228166 901 ntBASIC24.66■■□□□ 1.54
Chmp7Q8R1T1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Chmp7Q8R1T1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Chmp7Q8R1T1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC24.66■■□□□ 1.54
Chmp7Q8R1T1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC24.66■■□□□ 1.54
Chmp7Q8R1T1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.65■■□□□ 1.54
Chmp7Q8R1T1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Chmp7Q8R1T1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Chmp7Q8R1T1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Chmp7Q8R1T1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC24.64■■□□□ 1.54
Chmp7Q8R1T1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Chmp7Q8R1T1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Chmp7Q8R1T1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC24.64■■□□□ 1.54
Chmp7Q8R1T1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
Chmp7Q8R1T1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC24.64■■□□□ 1.54
Chmp7Q8R1T1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Chmp7Q8R1T1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Chmp7Q8R1T1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Chmp7Q8R1T1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Chmp7Q8R1T1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Chmp7Q8R1T1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC24.63■■□□□ 1.53
Chmp7Q8R1T1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Chmp7Q8R1T1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Chmp7Q8R1T1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Chmp7Q8R1T1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC24.62■■□□□ 1.53
Chmp7Q8R1T1 Gm26524-201ENSMUST00000192339 390 ntBASIC24.62■■□□□ 1.53
Chmp7Q8R1T1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC24.62■■□□□ 1.53
Chmp7Q8R1T1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
Chmp7Q8R1T1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Chmp7Q8R1T1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Chmp7Q8R1T1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Chmp7Q8R1T1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Chmp7Q8R1T1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Chmp7Q8R1T1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC24.62■■□□□ 1.53
Chmp7Q8R1T1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Chmp7Q8R1T1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Chmp7Q8R1T1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Chmp7Q8R1T1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Chmp7Q8R1T1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC24.61■■□□□ 1.53
Chmp7Q8R1T1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC24.61■■□□□ 1.53
Chmp7Q8R1T1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Chmp7Q8R1T1 AC135637.1-201ENSMUST00000227750 365 ntBASIC24.61■■□□□ 1.53
Chmp7Q8R1T1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Chmp7Q8R1T1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Chmp7Q8R1T1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC24.61■■□□□ 1.53
Chmp7Q8R1T1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Chmp7Q8R1T1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Chmp7Q8R1T1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Chmp7Q8R1T1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Chmp7Q8R1T1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
Chmp7Q8R1T1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
Chmp7Q8R1T1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC24.6■■□□□ 1.53
Chmp7Q8R1T1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC24.6■■□□□ 1.53
Chmp7Q8R1T1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC24.6■■□□□ 1.53
Chmp7Q8R1T1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Chmp7Q8R1T1 Gm20100-201ENSMUST00000209418 2272 ntBASIC24.59■■□□□ 1.53
Chmp7Q8R1T1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Chmp7Q8R1T1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC24.59■■□□□ 1.53
Chmp7Q8R1T1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Chmp7Q8R1T1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Chmp7Q8R1T1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Chmp7Q8R1T1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC24.59■■□□□ 1.53
Chmp7Q8R1T1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
Chmp7Q8R1T1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Chmp7Q8R1T1 Gm44672-201ENSMUST00000206944 1098 ntBASIC24.59■■□□□ 1.53
Chmp7Q8R1T1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Chmp7Q8R1T1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms