Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nudcd3Q8R1N4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nudcd3Q8R1N4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nudcd3Q8R1N4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.18■□□□□ 0.66
Nudcd3Q8R1N4 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.18■□□□□ 0.66
Nudcd3Q8R1N4 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.18■□□□□ 0.66
Nudcd3Q8R1N4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nudcd3Q8R1N4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nudcd3Q8R1N4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nudcd3Q8R1N4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nudcd3Q8R1N4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nudcd3Q8R1N4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nudcd3Q8R1N4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nudcd3Q8R1N4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nudcd3Q8R1N4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nudcd3Q8R1N4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nudcd3Q8R1N4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nudcd3Q8R1N4 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.17■□□□□ 0.66
Nudcd3Q8R1N4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nudcd3Q8R1N4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nudcd3Q8R1N4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nudcd3Q8R1N4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nudcd3Q8R1N4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nudcd3Q8R1N4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.16■□□□□ 0.66
Nudcd3Q8R1N4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.16■□□□□ 0.66
Nudcd3Q8R1N4 BC021767-201ENSMUST00000126387 1716 ntBASIC19.16■□□□□ 0.66
Nudcd3Q8R1N4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nudcd3Q8R1N4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nudcd3Q8R1N4 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.15■□□□□ 0.66
Nudcd3Q8R1N4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nudcd3Q8R1N4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nudcd3Q8R1N4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nudcd3Q8R1N4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Nudcd3Q8R1N4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nudcd3Q8R1N4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Nudcd3Q8R1N4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nudcd3Q8R1N4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nudcd3Q8R1N4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nudcd3Q8R1N4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nudcd3Q8R1N4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nudcd3Q8R1N4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nudcd3Q8R1N4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nudcd3Q8R1N4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nudcd3Q8R1N4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.14■□□□□ 0.65
Nudcd3Q8R1N4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.14■□□□□ 0.65
Nudcd3Q8R1N4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.14■□□□□ 0.65
Nudcd3Q8R1N4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.14■□□□□ 0.65
Nudcd3Q8R1N4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.14■□□□□ 0.65
Nudcd3Q8R1N4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nudcd3Q8R1N4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Nudcd3Q8R1N4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Nudcd3Q8R1N4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.14■□□□□ 0.65
Nudcd3Q8R1N4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nudcd3Q8R1N4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nudcd3Q8R1N4 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.14■□□□□ 0.65
Nudcd3Q8R1N4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nudcd3Q8R1N4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.13■□□□□ 0.65
Nudcd3Q8R1N4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nudcd3Q8R1N4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nudcd3Q8R1N4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.13■□□□□ 0.65
Nudcd3Q8R1N4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Nudcd3Q8R1N4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Nudcd3Q8R1N4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nudcd3Q8R1N4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nudcd3Q8R1N4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Nudcd3Q8R1N4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nudcd3Q8R1N4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nudcd3Q8R1N4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Nudcd3Q8R1N4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Nudcd3Q8R1N4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nudcd3Q8R1N4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Nudcd3Q8R1N4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nudcd3Q8R1N4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nudcd3Q8R1N4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nudcd3Q8R1N4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nudcd3Q8R1N4 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.12■□□□□ 0.65
Nudcd3Q8R1N4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Nudcd3Q8R1N4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nudcd3Q8R1N4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nudcd3Q8R1N4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.11■□□□□ 0.65
Nudcd3Q8R1N4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Nudcd3Q8R1N4 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.11■□□□□ 0.65
Nudcd3Q8R1N4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nudcd3Q8R1N4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nudcd3Q8R1N4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Nudcd3Q8R1N4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nudcd3Q8R1N4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nudcd3Q8R1N4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nudcd3Q8R1N4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nudcd3Q8R1N4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nudcd3Q8R1N4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
Nudcd3Q8R1N4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nudcd3Q8R1N4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nudcd3Q8R1N4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nudcd3Q8R1N4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nudcd3Q8R1N4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Nudcd3Q8R1N4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Nudcd3Q8R1N4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nudcd3Q8R1N4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nudcd3Q8R1N4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms