Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.76■□□□□ 0.59
Rab43Q8CG50 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab43Q8CG50 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab43Q8CG50 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rab43Q8CG50 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab43Q8CG50 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab43Q8CG50 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab43Q8CG50 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rab43Q8CG50 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rab43Q8CG50 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rab43Q8CG50 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rab43Q8CG50 Gm6211-202ENSMUST00000167849 925 ntBASIC18.75■□□□□ 0.59
Rab43Q8CG50 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.75■□□□□ 0.59
Rab43Q8CG50 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rab43Q8CG50 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Rab43Q8CG50 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab43Q8CG50 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.74■□□□□ 0.59
Rab43Q8CG50 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab43Q8CG50 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab43Q8CG50 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab43Q8CG50 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Rab43Q8CG50 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.74■□□□□ 0.59
Rab43Q8CG50 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rab43Q8CG50 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.74■□□□□ 0.59
Rab43Q8CG50 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab43Q8CG50 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rab43Q8CG50 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Rab43Q8CG50 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab43Q8CG50 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rab43Q8CG50 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab43Q8CG50 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab43Q8CG50 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Rab43Q8CG50 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Rab43Q8CG50 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Rab43Q8CG50 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab43Q8CG50 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab43Q8CG50 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.73■□□□□ 0.59
Rab43Q8CG50 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.73■□□□□ 0.59
Rab43Q8CG50 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab43Q8CG50 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab43Q8CG50 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rab43Q8CG50 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rab43Q8CG50 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab43Q8CG50 Gm7860-201ENSMUST00000121190 879 ntBASIC18.72■□□□□ 0.59
Rab43Q8CG50 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rab43Q8CG50 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rab43Q8CG50 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.72■□□□□ 0.59
Rab43Q8CG50 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab43Q8CG50 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab43Q8CG50 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
Rab43Q8CG50 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.72■□□□□ 0.59
Rab43Q8CG50 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab43Q8CG50 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab43Q8CG50 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rab43Q8CG50 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rab43Q8CG50 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab43Q8CG50 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rab43Q8CG50 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rab43Q8CG50 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rab43Q8CG50 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rab43Q8CG50 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rab43Q8CG50 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab43Q8CG50 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab43Q8CG50 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab43Q8CG50 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rab43Q8CG50 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.7■□□□□ 0.58
Rab43Q8CG50 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rab43Q8CG50 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rab43Q8CG50 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rab43Q8CG50 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.7■□□□□ 0.58
Rab43Q8CG50 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rab43Q8CG50 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rab43Q8CG50 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab43Q8CG50 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab43Q8CG50 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab43Q8CG50 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.7■□□□□ 0.58
Rab43Q8CG50 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Rab43Q8CG50 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab43Q8CG50 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab43Q8CG50 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab43Q8CG50 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab43Q8CG50 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab43Q8CG50 Gm12527-201ENSMUST00000117967 564 ntBASIC18.69■□□□□ 0.58
Rab43Q8CG50 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab43Q8CG50 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab43Q8CG50 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab43Q8CG50 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rab43Q8CG50 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rab43Q8CG50 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab43Q8CG50 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab43Q8CG50 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab43Q8CG50 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab43Q8CG50 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rab43Q8CG50 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab43Q8CG50 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Rab43Q8CG50 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.68■□□□□ 0.58
Rab43Q8CG50 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rab43Q8CG50 Gm22240-201ENSMUST00000175225 82 ntBASIC18.68■□□□□ 0.58
Rab43Q8CG50 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rab43Q8CG50 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms