Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ccdc60Q8C4J0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ccdc60Q8C4J0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC24.54■■□□□ 1.52
Ccdc60Q8C4J0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ccdc60Q8C4J0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC24.54■■□□□ 1.52
Ccdc60Q8C4J0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC24.54■■□□□ 1.52
Ccdc60Q8C4J0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ccdc60Q8C4J0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ccdc60Q8C4J0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ccdc60Q8C4J0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Ccdc60Q8C4J0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC24.54■■□□□ 1.52
Ccdc60Q8C4J0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ccdc60Q8C4J0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ccdc60Q8C4J0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ccdc60Q8C4J0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC24.53■■□□□ 1.52
Ccdc60Q8C4J0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC24.53■■□□□ 1.52
Ccdc60Q8C4J0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC24.53■■□□□ 1.52
Ccdc60Q8C4J0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC24.53■■□□□ 1.52
Ccdc60Q8C4J0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ccdc60Q8C4J0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ccdc60Q8C4J0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC24.53■■□□□ 1.52
Ccdc60Q8C4J0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ccdc60Q8C4J0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ccdc60Q8C4J0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ccdc60Q8C4J0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ccdc60Q8C4J0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ccdc60Q8C4J0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ccdc60Q8C4J0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ccdc60Q8C4J0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ccdc60Q8C4J0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ccdc60Q8C4J0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ccdc60Q8C4J0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
Ccdc60Q8C4J0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ccdc60Q8C4J0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Ccdc60Q8C4J0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Ccdc60Q8C4J0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
Ccdc60Q8C4J0 Gm10129-202ENSMUST00000193100 1316 ntBASIC24.52■■□□□ 1.52
Ccdc60Q8C4J0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC24.52■■□□□ 1.52
Ccdc60Q8C4J0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Ccdc60Q8C4J0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Ccdc60Q8C4J0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ccdc60Q8C4J0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC24.51■■□□□ 1.51
Ccdc60Q8C4J0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Ccdc60Q8C4J0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Ccdc60Q8C4J0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Ccdc60Q8C4J0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ccdc60Q8C4J0 Gm37352-201ENSMUST00000193908 2181 ntBASIC24.5■■□□□ 1.51
Ccdc60Q8C4J0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ccdc60Q8C4J0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ccdc60Q8C4J0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ccdc60Q8C4J0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ccdc60Q8C4J0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Ccdc60Q8C4J0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ccdc60Q8C4J0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ccdc60Q8C4J0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ccdc60Q8C4J0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC24.5■■□□□ 1.51
Ccdc60Q8C4J0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ccdc60Q8C4J0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ccdc60Q8C4J0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Ccdc60Q8C4J0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ccdc60Q8C4J0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ccdc60Q8C4J0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ccdc60Q8C4J0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC24.48■■□□□ 1.51
Ccdc60Q8C4J0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Ccdc60Q8C4J0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ccdc60Q8C4J0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Ccdc60Q8C4J0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
Ccdc60Q8C4J0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC24.48■■□□□ 1.51
Ccdc60Q8C4J0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Ccdc60Q8C4J0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC24.48■■□□□ 1.51
Ccdc60Q8C4J0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ccdc60Q8C4J0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ccdc60Q8C4J0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ccdc60Q8C4J0 Gm9988-201ENSMUST00000069786 435 ntBASIC24.48■■□□□ 1.51
Ccdc60Q8C4J0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ccdc60Q8C4J0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ccdc60Q8C4J0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC24.47■■□□□ 1.51
Ccdc60Q8C4J0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ccdc60Q8C4J0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
Ccdc60Q8C4J0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC24.47■■□□□ 1.51
Ccdc60Q8C4J0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ccdc60Q8C4J0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ccdc60Q8C4J0 Gm10493-201ENSMUST00000097270 612 ntBASIC24.47■■□□□ 1.51
Ccdc60Q8C4J0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ccdc60Q8C4J0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ccdc60Q8C4J0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ccdc60Q8C4J0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ccdc60Q8C4J0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ccdc60Q8C4J0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ccdc60Q8C4J0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
Ccdc60Q8C4J0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ccdc60Q8C4J0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC24.45■■□□□ 1.51
Ccdc60Q8C4J0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Ccdc60Q8C4J0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ccdc60Q8C4J0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ccdc60Q8C4J0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ccdc60Q8C4J0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC24.45■■□□□ 1.5
Ccdc60Q8C4J0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC24.45■■□□□ 1.5
Ccdc60Q8C4J0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ccdc60Q8C4J0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC24.45■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms