Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Usp40Q8BWR4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Usp40Q8BWR4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Usp40Q8BWR4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Usp40Q8BWR4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
Usp40Q8BWR4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC26.54■■□□□ 1.84
Usp40Q8BWR4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Usp40Q8BWR4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Usp40Q8BWR4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Usp40Q8BWR4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Usp40Q8BWR4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Usp40Q8BWR4 Gm5408-201ENSMUST00000197998 747 ntBASIC26.53■■□□□ 1.84
Usp40Q8BWR4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Usp40Q8BWR4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC26.53■■□□□ 1.84
Usp40Q8BWR4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Usp40Q8BWR4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Usp40Q8BWR4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Usp40Q8BWR4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC26.52■■□□□ 1.84
Usp40Q8BWR4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC26.52■■□□□ 1.84
Usp40Q8BWR4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC26.52■■□□□ 1.84
Usp40Q8BWR4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC26.52■■□□□ 1.84
Usp40Q8BWR4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Usp40Q8BWR4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC26.52■■□□□ 1.84
Usp40Q8BWR4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
Usp40Q8BWR4 Gm38160-201ENSMUST00000193090 2499 ntBASIC26.51■■□□□ 1.84
Usp40Q8BWR4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Usp40Q8BWR4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Usp40Q8BWR4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Usp40Q8BWR4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC26.51■■□□□ 1.83
Usp40Q8BWR4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Usp40Q8BWR4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Usp40Q8BWR4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Usp40Q8BWR4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
Usp40Q8BWR4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC26.5■■□□□ 1.83
Usp40Q8BWR4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Usp40Q8BWR4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC26.5■■□□□ 1.83
Usp40Q8BWR4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC26.5■■□□□ 1.83
Usp40Q8BWR4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC26.5■■□□□ 1.83
Usp40Q8BWR4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Usp40Q8BWR4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Usp40Q8BWR4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Usp40Q8BWR4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Usp40Q8BWR4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC26.49■■□□□ 1.83
Usp40Q8BWR4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Usp40Q8BWR4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Usp40Q8BWR4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Usp40Q8BWR4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Usp40Q8BWR4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Usp40Q8BWR4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Usp40Q8BWR4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC26.48■■□□□ 1.83
Usp40Q8BWR4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Usp40Q8BWR4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Usp40Q8BWR4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Usp40Q8BWR4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC26.48■■□□□ 1.83
Usp40Q8BWR4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Usp40Q8BWR4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Usp40Q8BWR4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Usp40Q8BWR4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Usp40Q8BWR4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Usp40Q8BWR4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Usp40Q8BWR4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC26.47■■□□□ 1.83
Usp40Q8BWR4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Usp40Q8BWR4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Usp40Q8BWR4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC26.46■■□□□ 1.83
Usp40Q8BWR4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC26.46■■□□□ 1.83
Usp40Q8BWR4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Usp40Q8BWR4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Usp40Q8BWR4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Usp40Q8BWR4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC26.45■■□□□ 1.83
Usp40Q8BWR4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC26.45■■□□□ 1.82
Usp40Q8BWR4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Usp40Q8BWR4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
Usp40Q8BWR4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Usp40Q8BWR4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Usp40Q8BWR4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
Usp40Q8BWR4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Usp40Q8BWR4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Usp40Q8BWR4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Usp40Q8BWR4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Usp40Q8BWR4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
Usp40Q8BWR4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Usp40Q8BWR4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Usp40Q8BWR4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Usp40Q8BWR4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Usp40Q8BWR4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Usp40Q8BWR4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC26.44■■□□□ 1.82
Usp40Q8BWR4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Usp40Q8BWR4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Usp40Q8BWR4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Usp40Q8BWR4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Usp40Q8BWR4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC26.43■■□□□ 1.82
Usp40Q8BWR4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Usp40Q8BWR4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Usp40Q8BWR4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Usp40Q8BWR4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Usp40Q8BWR4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Usp40Q8BWR4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Usp40Q8BWR4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Usp40Q8BWR4 Gm26971-201ENSMUST00000182423 1072 ntBASIC26.42■■□□□ 1.82
Usp40Q8BWR4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms