Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup54Q8BTS4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Nup54Q8BTS4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.72■□□□□ 0.75
Nup54Q8BTS4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Nup54Q8BTS4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup54Q8BTS4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.71■□□□□ 0.75
Nup54Q8BTS4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup54Q8BTS4 Gm7860-201ENSMUST00000121190 879 ntBASIC19.71■□□□□ 0.75
Nup54Q8BTS4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nup54Q8BTS4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup54Q8BTS4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.71■□□□□ 0.75
Nup54Q8BTS4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup54Q8BTS4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Nup54Q8BTS4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup54Q8BTS4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup54Q8BTS4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
Nup54Q8BTS4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Nup54Q8BTS4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nup54Q8BTS4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Nup54Q8BTS4 Gm10849-201ENSMUST00000100397 618 ntBASIC19.7■□□□□ 0.74
Nup54Q8BTS4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup54Q8BTS4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Nup54Q8BTS4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.7■□□□□ 0.74
Nup54Q8BTS4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup54Q8BTS4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup54Q8BTS4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Nup54Q8BTS4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.69■□□□□ 0.74
Nup54Q8BTS4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup54Q8BTS4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup54Q8BTS4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nup54Q8BTS4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nup54Q8BTS4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.69■□□□□ 0.74
Nup54Q8BTS4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup54Q8BTS4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup54Q8BTS4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.69■□□□□ 0.74
Nup54Q8BTS4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.69■□□□□ 0.74
Nup54Q8BTS4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nup54Q8BTS4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nup54Q8BTS4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup54Q8BTS4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup54Q8BTS4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Nup54Q8BTS4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup54Q8BTS4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup54Q8BTS4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nup54Q8BTS4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.68■□□□□ 0.74
Nup54Q8BTS4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup54Q8BTS4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nup54Q8BTS4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nup54Q8BTS4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Nup54Q8BTS4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.67■□□□□ 0.74
Nup54Q8BTS4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Nup54Q8BTS4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nup54Q8BTS4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup54Q8BTS4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nup54Q8BTS4 Gm13146-201ENSMUST00000118508 780 ntBASIC19.67■□□□□ 0.74
Nup54Q8BTS4 AV356131-201ENSMUST00000206201 750 ntBASIC19.67■□□□□ 0.74
Nup54Q8BTS4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup54Q8BTS4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup54Q8BTS4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Nup54Q8BTS4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nup54Q8BTS4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup54Q8BTS4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup54Q8BTS4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nup54Q8BTS4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup54Q8BTS4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup54Q8BTS4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.66■□□□□ 0.74
Nup54Q8BTS4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup54Q8BTS4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.66■□□□□ 0.74
Nup54Q8BTS4 Gm42569-201ENSMUST00000200539 472 ntBASIC19.66■□□□□ 0.74
Nup54Q8BTS4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.66■□□□□ 0.74
Nup54Q8BTS4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.66■□□□□ 0.74
Nup54Q8BTS4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup54Q8BTS4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup54Q8BTS4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup54Q8BTS4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup54Q8BTS4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nup54Q8BTS4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup54Q8BTS4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nup54Q8BTS4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup54Q8BTS4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nup54Q8BTS4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup54Q8BTS4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nup54Q8BTS4 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.65■□□□□ 0.74
Nup54Q8BTS4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.65■□□□□ 0.74
Nup54Q8BTS4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Nup54Q8BTS4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup54Q8BTS4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.65■□□□□ 0.74
Nup54Q8BTS4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup54Q8BTS4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nup54Q8BTS4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup54Q8BTS4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup54Q8BTS4 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.65■□□□□ 0.74
Nup54Q8BTS4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Nup54Q8BTS4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nup54Q8BTS4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Nup54Q8BTS4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup54Q8BTS4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.64■□□□□ 0.73
Nup54Q8BTS4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup54Q8BTS4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup54Q8BTS4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms