Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.59■□□□□ 0.57
Cpsf4Q8BQZ5 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf4Q8BQZ5 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf4Q8BQZ5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cpsf4Q8BQZ5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cpsf4Q8BQZ5 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf4Q8BQZ5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cpsf4Q8BQZ5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cpsf4Q8BQZ5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.58■□□□□ 0.57
Cpsf4Q8BQZ5 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf4Q8BQZ5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf4Q8BQZ5 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf4Q8BQZ5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf4Q8BQZ5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.58■□□□□ 0.56
Cpsf4Q8BQZ5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf4Q8BQZ5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.58■□□□□ 0.56
Cpsf4Q8BQZ5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf4Q8BQZ5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
Cpsf4Q8BQZ5 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf4Q8BQZ5 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf4Q8BQZ5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf4Q8BQZ5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cpsf4Q8BQZ5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cpsf4Q8BQZ5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf4Q8BQZ5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.57■□□□□ 0.56
Cpsf4Q8BQZ5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf4Q8BQZ5 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf4Q8BQZ5 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cpsf4Q8BQZ5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.57■□□□□ 0.56
Cpsf4Q8BQZ5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cpsf4Q8BQZ5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.57■□□□□ 0.56
Cpsf4Q8BQZ5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf4Q8BQZ5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
Cpsf4Q8BQZ5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Cpsf4Q8BQZ5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf4Q8BQZ5 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf4Q8BQZ5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf4Q8BQZ5 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf4Q8BQZ5 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.56■□□□□ 0.56
Cpsf4Q8BQZ5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf4Q8BQZ5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf4Q8BQZ5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.56■□□□□ 0.56
Cpsf4Q8BQZ5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf4Q8BQZ5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf4Q8BQZ5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cpsf4Q8BQZ5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.56■□□□□ 0.56
Cpsf4Q8BQZ5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Cpsf4Q8BQZ5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf4Q8BQZ5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf4Q8BQZ5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf4Q8BQZ5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf4Q8BQZ5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cpsf4Q8BQZ5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf4Q8BQZ5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf4Q8BQZ5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.55■□□□□ 0.56
Cpsf4Q8BQZ5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
Cpsf4Q8BQZ5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf4Q8BQZ5 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.55■□□□□ 0.56
Cpsf4Q8BQZ5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf4Q8BQZ5 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf4Q8BQZ5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.55■□□□□ 0.56
Cpsf4Q8BQZ5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf4Q8BQZ5 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpsf4Q8BQZ5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpsf4Q8BQZ5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Cpsf4Q8BQZ5 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
Cpsf4Q8BQZ5 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Cpsf4Q8BQZ5 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.54■□□□□ 0.56
Cpsf4Q8BQZ5 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.54■□□□□ 0.56
Cpsf4Q8BQZ5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cpsf4Q8BQZ5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpsf4Q8BQZ5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cpsf4Q8BQZ5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf4Q8BQZ5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf4Q8BQZ5 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Cpsf4Q8BQZ5 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf4Q8BQZ5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf4Q8BQZ5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf4Q8BQZ5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf4Q8BQZ5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf4Q8BQZ5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf4Q8BQZ5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf4Q8BQZ5 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf4Q8BQZ5 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.52■□□□□ 0.56
Cpsf4Q8BQZ5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cpsf4Q8BQZ5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cpsf4Q8BQZ5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cpsf4Q8BQZ5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cpsf4Q8BQZ5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cpsf4Q8BQZ5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cpsf4Q8BQZ5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Cpsf4Q8BQZ5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cpsf4Q8BQZ5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cpsf4Q8BQZ5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpsf4Q8BQZ5 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cpsf4Q8BQZ5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpsf4Q8BQZ5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpsf4Q8BQZ5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.51■□□□□ 0.55
Cpsf4Q8BQZ5 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cpsf4Q8BQZ5 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms