Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Srrm4Q8BKA3 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.64■□□□□ 0.25
Srrm4Q8BKA3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Srrm4Q8BKA3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Srrm4Q8BKA3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.64■□□□□ 0.25
Srrm4Q8BKA3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Srrm4Q8BKA3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Srrm4Q8BKA3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
Srrm4Q8BKA3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Srrm4Q8BKA3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Srrm4Q8BKA3 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.64■□□□□ 0.25
Srrm4Q8BKA3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Srrm4Q8BKA3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srrm4Q8BKA3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Srrm4Q8BKA3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.63■□□□□ 0.25
Srrm4Q8BKA3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.63■□□□□ 0.25
Srrm4Q8BKA3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srrm4Q8BKA3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srrm4Q8BKA3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.63■□□□□ 0.25
Srrm4Q8BKA3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srrm4Q8BKA3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Srrm4Q8BKA3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Srrm4Q8BKA3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm4Q8BKA3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm4Q8BKA3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm4Q8BKA3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm4Q8BKA3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Srrm4Q8BKA3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm4Q8BKA3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.62■□□□□ 0.25
Srrm4Q8BKA3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm4Q8BKA3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Srrm4Q8BKA3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm4Q8BKA3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Srrm4Q8BKA3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm4Q8BKA3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm4Q8BKA3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm4Q8BKA3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm4Q8BKA3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Srrm4Q8BKA3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm4Q8BKA3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm4Q8BKA3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.62■□□□□ 0.25
Srrm4Q8BKA3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Srrm4Q8BKA3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Srrm4Q8BKA3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm4Q8BKA3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm4Q8BKA3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm4Q8BKA3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm4Q8BKA3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Srrm4Q8BKA3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm4Q8BKA3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.61■□□□□ 0.25
Srrm4Q8BKA3 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.61■□□□□ 0.25
Srrm4Q8BKA3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm4Q8BKA3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Srrm4Q8BKA3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm4Q8BKA3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Srrm4Q8BKA3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Srrm4Q8BKA3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Srrm4Q8BKA3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srrm4Q8BKA3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srrm4Q8BKA3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srrm4Q8BKA3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.59■□□□□ 0.25
Srrm4Q8BKA3 Gm18284-201ENSMUST00000172604 624 ntBASIC16.59■□□□□ 0.25
Srrm4Q8BKA3 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.59■□□□□ 0.25
Srrm4Q8BKA3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srrm4Q8BKA3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Srrm4Q8BKA3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.59■□□□□ 0.25
Srrm4Q8BKA3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Srrm4Q8BKA3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
Srrm4Q8BKA3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Srrm4Q8BKA3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Srrm4Q8BKA3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Srrm4Q8BKA3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Srrm4Q8BKA3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Srrm4Q8BKA3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Srrm4Q8BKA3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.58■□□□□ 0.24
Srrm4Q8BKA3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.57■□□□□ 0.24
Srrm4Q8BKA3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Srrm4Q8BKA3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms