Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim65Q8BFW4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim65Q8BFW4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trim65Q8BFW4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim65Q8BFW4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim65Q8BFW4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Trim65Q8BFW4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.58■□□□□ 0.89
Trim65Q8BFW4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim65Q8BFW4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim65Q8BFW4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Trim65Q8BFW4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
Trim65Q8BFW4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim65Q8BFW4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Trim65Q8BFW4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim65Q8BFW4 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.58■□□□□ 0.88
Trim65Q8BFW4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim65Q8BFW4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trim65Q8BFW4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim65Q8BFW4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trim65Q8BFW4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim65Q8BFW4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Trim65Q8BFW4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim65Q8BFW4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim65Q8BFW4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim65Q8BFW4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim65Q8BFW4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim65Q8BFW4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim65Q8BFW4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim65Q8BFW4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.56■□□□□ 0.88
Trim65Q8BFW4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim65Q8BFW4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim65Q8BFW4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim65Q8BFW4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.56■□□□□ 0.88
Trim65Q8BFW4 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.56■□□□□ 0.88
Trim65Q8BFW4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim65Q8BFW4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim65Q8BFW4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim65Q8BFW4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Trim65Q8BFW4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Trim65Q8BFW4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim65Q8BFW4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim65Q8BFW4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim65Q8BFW4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim65Q8BFW4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim65Q8BFW4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim65Q8BFW4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
Trim65Q8BFW4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim65Q8BFW4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim65Q8BFW4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim65Q8BFW4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim65Q8BFW4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim65Q8BFW4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.54■□□□□ 0.88
Trim65Q8BFW4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim65Q8BFW4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Trim65Q8BFW4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim65Q8BFW4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim65Q8BFW4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim65Q8BFW4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Trim65Q8BFW4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim65Q8BFW4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim65Q8BFW4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim65Q8BFW4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Trim65Q8BFW4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim65Q8BFW4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim65Q8BFW4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim65Q8BFW4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Trim65Q8BFW4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Trim65Q8BFW4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim65Q8BFW4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim65Q8BFW4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim65Q8BFW4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim65Q8BFW4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim65Q8BFW4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim65Q8BFW4 Gm27801-201ENSMUST00000184174 223 ntBASIC20.52■□□□□ 0.88
Trim65Q8BFW4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim65Q8BFW4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Trim65Q8BFW4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Trim65Q8BFW4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
Trim65Q8BFW4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Trim65Q8BFW4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim65Q8BFW4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim65Q8BFW4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim65Q8BFW4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim65Q8BFW4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim65Q8BFW4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim65Q8BFW4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.51■□□□□ 0.87
Trim65Q8BFW4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.51■□□□□ 0.87
Trim65Q8BFW4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim65Q8BFW4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim65Q8BFW4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trim65Q8BFW4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim65Q8BFW4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim65Q8BFW4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trim65Q8BFW4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.5■□□□□ 0.87
Trim65Q8BFW4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim65Q8BFW4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim65Q8BFW4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trim65Q8BFW4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim65Q8BFW4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.5■□□□□ 0.87
Trim65Q8BFW4 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms