Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp8Q80U87 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp8Q80U87 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Usp8Q80U87 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Usp8Q80U87 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp8Q80U87 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.15■□□□□ 0.66
Usp8Q80U87 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.15■□□□□ 0.66
Usp8Q80U87 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp8Q80U87 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp8Q80U87 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp8Q80U87 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.15■□□□□ 0.66
Usp8Q80U87 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp8Q80U87 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Usp8Q80U87 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Usp8Q80U87 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Usp8Q80U87 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.14■□□□□ 0.65
Usp8Q80U87 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Usp8Q80U87 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp8Q80U87 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.14■□□□□ 0.65
Usp8Q80U87 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Usp8Q80U87 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.14■□□□□ 0.65
Usp8Q80U87 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp8Q80U87 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp8Q80U87 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp8Q80U87 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp8Q80U87 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.13■□□□□ 0.65
Usp8Q80U87 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp8Q80U87 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp8Q80U87 Gm9847-201ENSMUST00000052528 599 ntBASIC19.13■□□□□ 0.65
Usp8Q80U87 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Usp8Q80U87 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp8Q80U87 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp8Q80U87 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp8Q80U87 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Usp8Q80U87 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp8Q80U87 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp8Q80U87 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp8Q80U87 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp8Q80U87 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp8Q80U87 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp8Q80U87 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Usp8Q80U87 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp8Q80U87 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp8Q80U87 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.11■□□□□ 0.65
Usp8Q80U87 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp8Q80U87 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp8Q80U87 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp8Q80U87 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp8Q80U87 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp8Q80U87 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp8Q80U87 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp8Q80U87 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Usp8Q80U87 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp8Q80U87 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp8Q80U87 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp8Q80U87 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Usp8Q80U87 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp8Q80U87 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.1■□□□□ 0.65
Usp8Q80U87 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Usp8Q80U87 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp8Q80U87 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Usp8Q80U87 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Usp8Q80U87 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Usp8Q80U87 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Usp8Q80U87 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp8Q80U87 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp8Q80U87 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Usp8Q80U87 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Usp8Q80U87 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp8Q80U87 AA386476-201ENSMUST00000098781 1665 ntBASIC19.1■□□□□ 0.65
Usp8Q80U87 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp8Q80U87 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Usp8Q80U87 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp8Q80U87 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp8Q80U87 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Usp8Q80U87 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp8Q80U87 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Usp8Q80U87 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.09■□□□□ 0.65
Usp8Q80U87 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Usp8Q80U87 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Usp8Q80U87 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp8Q80U87 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp8Q80U87 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Usp8Q80U87 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp8Q80U87 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Usp8Q80U87 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp8Q80U87 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp8Q80U87 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp8Q80U87 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Usp8Q80U87 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Usp8Q80U87 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp8Q80U87 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Usp8Q80U87 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp8Q80U87 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp8Q80U87 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Usp8Q80U87 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
Usp8Q80U87 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp8Q80U87 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp8Q80U87 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.07■□□□□ 0.64
Usp8Q80U87 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms