Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pif1Q80SX8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pif1Q80SX8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.68■□□□□ 0.42
Pif1Q80SX8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pif1Q80SX8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pif1Q80SX8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pif1Q80SX8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.68■□□□□ 0.42
Pif1Q80SX8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pif1Q80SX8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.68■□□□□ 0.42
Pif1Q80SX8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.68■□□□□ 0.42
Pif1Q80SX8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Pif1Q80SX8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pif1Q80SX8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Pif1Q80SX8 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.67■□□□□ 0.42
Pif1Q80SX8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.67■□□□□ 0.42
Pif1Q80SX8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pif1Q80SX8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pif1Q80SX8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pif1Q80SX8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pif1Q80SX8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Pif1Q80SX8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pif1Q80SX8 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.67■□□□□ 0.42
Pif1Q80SX8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pif1Q80SX8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pif1Q80SX8 Gm7290-201ENSMUST00000104990 617 ntBASIC17.66■□□□□ 0.42
Pif1Q80SX8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.66■□□□□ 0.42
Pif1Q80SX8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pif1Q80SX8 Gm12918-201ENSMUST00000120234 636 ntBASIC17.66■□□□□ 0.42
Pif1Q80SX8 Gm15710-201ENSMUST00000121821 636 ntBASIC17.66■□□□□ 0.42
Pif1Q80SX8 Gm5075-201ENSMUST00000196916 622 ntBASIC17.66■□□□□ 0.42
Pif1Q80SX8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.66■□□□□ 0.42
Pif1Q80SX8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pif1Q80SX8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.66■□□□□ 0.42
Pif1Q80SX8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.66■□□□□ 0.42
Pif1Q80SX8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pif1Q80SX8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pif1Q80SX8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pif1Q80SX8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pif1Q80SX8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pif1Q80SX8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pif1Q80SX8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pif1Q80SX8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pif1Q80SX8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pif1Q80SX8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pif1Q80SX8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pif1Q80SX8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pif1Q80SX8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pif1Q80SX8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pif1Q80SX8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.65■□□□□ 0.42
Pif1Q80SX8 Gm6420-201ENSMUST00000193885 723 ntBASIC17.65■□□□□ 0.42
Pif1Q80SX8 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.65■□□□□ 0.42
Pif1Q80SX8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
Pif1Q80SX8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pif1Q80SX8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.65■□□□□ 0.42
Pif1Q80SX8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pif1Q80SX8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pif1Q80SX8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pif1Q80SX8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pif1Q80SX8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pif1Q80SX8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Pif1Q80SX8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.64■□□□□ 0.41
Pif1Q80SX8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.64■□□□□ 0.41
Pif1Q80SX8 Gm5408-201ENSMUST00000197998 747 ntBASIC17.64■□□□□ 0.41
Pif1Q80SX8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pif1Q80SX8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pif1Q80SX8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Pif1Q80SX8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.64■□□□□ 0.41
Pif1Q80SX8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pif1Q80SX8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pif1Q80SX8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pif1Q80SX8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pif1Q80SX8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Pif1Q80SX8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.63■□□□□ 0.41
Pif1Q80SX8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pif1Q80SX8 Gm13148-201ENSMUST00000118892 745 ntBASIC17.63■□□□□ 0.41
Pif1Q80SX8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.63■□□□□ 0.41
Pif1Q80SX8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pif1Q80SX8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pif1Q80SX8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Pif1Q80SX8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pif1Q80SX8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pif1Q80SX8 AA386476-201ENSMUST00000098781 1665 ntBASIC17.63■□□□□ 0.41
Pif1Q80SX8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pif1Q80SX8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pif1Q80SX8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pif1Q80SX8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pif1Q80SX8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pif1Q80SX8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pif1Q80SX8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pif1Q80SX8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pif1Q80SX8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Pif1Q80SX8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.62■□□□□ 0.41
Pif1Q80SX8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.62■□□□□ 0.41
Pif1Q80SX8 Gm20760-201ENSMUST00000179197 648 ntBASIC17.62■□□□□ 0.41
Pif1Q80SX8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pif1Q80SX8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pif1Q80SX8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pif1Q80SX8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pif1Q80SX8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pif1Q80SX8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms