Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf139Q7TMV1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rnf139Q7TMV1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf139Q7TMV1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
Rnf139Q7TMV1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf139Q7TMV1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf139Q7TMV1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.58■□□□□ 0.89
Rnf139Q7TMV1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf139Q7TMV1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rnf139Q7TMV1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf139Q7TMV1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf139Q7TMV1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf139Q7TMV1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf139Q7TMV1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf139Q7TMV1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf139Q7TMV1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf139Q7TMV1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf139Q7TMV1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf139Q7TMV1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf139Q7TMV1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rnf139Q7TMV1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf139Q7TMV1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rnf139Q7TMV1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rnf139Q7TMV1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf139Q7TMV1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Rnf139Q7TMV1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf139Q7TMV1 Gm15039-201ENSMUST00000118914 875 ntBASIC20.56■□□□□ 0.88
Rnf139Q7TMV1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.56■□□□□ 0.88
Rnf139Q7TMV1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.56■□□□□ 0.88
Rnf139Q7TMV1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.56■□□□□ 0.88
Rnf139Q7TMV1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf139Q7TMV1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf139Q7TMV1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Rnf139Q7TMV1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf139Q7TMV1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf139Q7TMV1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Rnf139Q7TMV1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf139Q7TMV1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf139Q7TMV1 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.55■□□□□ 0.88
Rnf139Q7TMV1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf139Q7TMV1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.55■□□□□ 0.88
Rnf139Q7TMV1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.55■□□□□ 0.88
Rnf139Q7TMV1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf139Q7TMV1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.55■□□□□ 0.88
Rnf139Q7TMV1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.55■□□□□ 0.88
Rnf139Q7TMV1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf139Q7TMV1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf139Q7TMV1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rnf139Q7TMV1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.55■□□□□ 0.88
Rnf139Q7TMV1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf139Q7TMV1 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.54■□□□□ 0.88
Rnf139Q7TMV1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rnf139Q7TMV1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf139Q7TMV1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.54■□□□□ 0.88
Rnf139Q7TMV1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf139Q7TMV1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.54■□□□□ 0.88
Rnf139Q7TMV1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf139Q7TMV1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf139Q7TMV1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf139Q7TMV1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf139Q7TMV1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf139Q7TMV1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.53■□□□□ 0.88
Rnf139Q7TMV1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf139Q7TMV1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf139Q7TMV1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.53■□□□□ 0.88
Rnf139Q7TMV1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf139Q7TMV1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf139Q7TMV1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rnf139Q7TMV1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf139Q7TMV1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf139Q7TMV1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rnf139Q7TMV1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf139Q7TMV1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf139Q7TMV1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.52■□□□□ 0.88
Rnf139Q7TMV1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf139Q7TMV1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf139Q7TMV1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf139Q7TMV1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf139Q7TMV1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Rnf139Q7TMV1 Gm7860-201ENSMUST00000121190 879 ntBASIC20.52■□□□□ 0.88
Rnf139Q7TMV1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.52■□□□□ 0.88
Rnf139Q7TMV1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf139Q7TMV1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Rnf139Q7TMV1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rnf139Q7TMV1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf139Q7TMV1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf139Q7TMV1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf139Q7TMV1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf139Q7TMV1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.51■□□□□ 0.87
Rnf139Q7TMV1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf139Q7TMV1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Rnf139Q7TMV1 Gm9988-201ENSMUST00000069786 435 ntBASIC20.51■□□□□ 0.87
Rnf139Q7TMV1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf139Q7TMV1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Rnf139Q7TMV1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Rnf139Q7TMV1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rnf139Q7TMV1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf139Q7TMV1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.5■□□□□ 0.87
Rnf139Q7TMV1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.5■□□□□ 0.87
Rnf139Q7TMV1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms