Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vsx2Q61412 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vsx2Q61412 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vsx2Q61412 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vsx2Q61412 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vsx2Q61412 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Vsx2Q61412 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vsx2Q61412 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vsx2Q61412 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Vsx2Q61412 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vsx2Q61412 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vsx2Q61412 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Vsx2Q61412 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vsx2Q61412 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vsx2Q61412 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vsx2Q61412 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vsx2Q61412 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Vsx2Q61412 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vsx2Q61412 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vsx2Q61412 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vsx2Q61412 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vsx2Q61412 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vsx2Q61412 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vsx2Q61412 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vsx2Q61412 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vsx2Q61412 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Vsx2Q61412 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Vsx2Q61412 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.64■□□□□ 0.57
Vsx2Q61412 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vsx2Q61412 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vsx2Q61412 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vsx2Q61412 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vsx2Q61412 Gm11421-201ENSMUST00000122124 294 ntBASIC18.64■□□□□ 0.57
Vsx2Q61412 Gm43060-201ENSMUST00000200621 289 ntBASIC18.64■□□□□ 0.57
Vsx2Q61412 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.64■□□□□ 0.57
Vsx2Q61412 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vsx2Q61412 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vsx2Q61412 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Vsx2Q61412 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vsx2Q61412 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.63■□□□□ 0.57
Vsx2Q61412 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vsx2Q61412 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vsx2Q61412 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Vsx2Q61412 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vsx2Q61412 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vsx2Q61412 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.63■□□□□ 0.57
Vsx2Q61412 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.63■□□□□ 0.57
Vsx2Q61412 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.63■□□□□ 0.57
Vsx2Q61412 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vsx2Q61412 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.63■□□□□ 0.57
Vsx2Q61412 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vsx2Q61412 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vsx2Q61412 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vsx2Q61412 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vsx2Q61412 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.62■□□□□ 0.57
Vsx2Q61412 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vsx2Q61412 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Vsx2Q61412 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.62■□□□□ 0.57
Vsx2Q61412 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vsx2Q61412 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.62■□□□□ 0.57
Vsx2Q61412 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vsx2Q61412 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vsx2Q61412 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Vsx2Q61412 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.61■□□□□ 0.57
Vsx2Q61412 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vsx2Q61412 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.61■□□□□ 0.57
Vsx2Q61412 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vsx2Q61412 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vsx2Q61412 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Vsx2Q61412 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vsx2Q61412 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vsx2Q61412 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vsx2Q61412 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Vsx2Q61412 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vsx2Q61412 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vsx2Q61412 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.6■□□□□ 0.57
Vsx2Q61412 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vsx2Q61412 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vsx2Q61412 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.6■□□□□ 0.57
Vsx2Q61412 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vsx2Q61412 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vsx2Q61412 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vsx2Q61412 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vsx2Q61412 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Vsx2Q61412 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vsx2Q61412 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vsx2Q61412 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vsx2Q61412 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Vsx2Q61412 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vsx2Q61412 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Vsx2Q61412 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vsx2Q61412 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vsx2Q61412 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vsx2Q61412 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vsx2Q61412 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vsx2Q61412 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vsx2Q61412 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.59■□□□□ 0.57
Vsx2Q61412 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vsx2Q61412 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
Vsx2Q61412 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms