Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Atp13a4Q5XF90 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atp13a4Q5XF90 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Atp13a4Q5XF90 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atp13a4Q5XF90 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Atp13a4Q5XF90 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Atp13a4Q5XF90 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
Atp13a4Q5XF90 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.8■□□□□ 0.92
Atp13a4Q5XF90 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Atp13a4Q5XF90 Gm27801-201ENSMUST00000184174 223 ntBASIC20.8■□□□□ 0.92
Atp13a4Q5XF90 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atp13a4Q5XF90 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atp13a4Q5XF90 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atp13a4Q5XF90 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.8■□□□□ 0.92
Atp13a4Q5XF90 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atp13a4Q5XF90 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Atp13a4Q5XF90 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Atp13a4Q5XF90 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atp13a4Q5XF90 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atp13a4Q5XF90 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atp13a4Q5XF90 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atp13a4Q5XF90 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atp13a4Q5XF90 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Atp13a4Q5XF90 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atp13a4Q5XF90 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Atp13a4Q5XF90 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Atp13a4Q5XF90 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.78■□□□□ 0.92
Atp13a4Q5XF90 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atp13a4Q5XF90 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atp13a4Q5XF90 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atp13a4Q5XF90 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.78■□□□□ 0.92
Atp13a4Q5XF90 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atp13a4Q5XF90 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atp13a4Q5XF90 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Atp13a4Q5XF90 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atp13a4Q5XF90 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atp13a4Q5XF90 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.77■□□□□ 0.92
Atp13a4Q5XF90 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atp13a4Q5XF90 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atp13a4Q5XF90 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atp13a4Q5XF90 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.77■□□□□ 0.92
Atp13a4Q5XF90 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atp13a4Q5XF90 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atp13a4Q5XF90 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atp13a4Q5XF90 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Atp13a4Q5XF90 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Atp13a4Q5XF90 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atp13a4Q5XF90 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atp13a4Q5XF90 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atp13a4Q5XF90 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atp13a4Q5XF90 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atp13a4Q5XF90 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Atp13a4Q5XF90 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Atp13a4Q5XF90 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atp13a4Q5XF90 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atp13a4Q5XF90 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atp13a4Q5XF90 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Atp13a4Q5XF90 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atp13a4Q5XF90 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Atp13a4Q5XF90 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.74■□□□□ 0.91
Atp13a4Q5XF90 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Atp13a4Q5XF90 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.74■□□□□ 0.91
Atp13a4Q5XF90 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Atp13a4Q5XF90 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Atp13a4Q5XF90 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atp13a4Q5XF90 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Atp13a4Q5XF90 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Atp13a4Q5XF90 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atp13a4Q5XF90 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Atp13a4Q5XF90 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atp13a4Q5XF90 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atp13a4Q5XF90 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atp13a4Q5XF90 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atp13a4Q5XF90 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Atp13a4Q5XF90 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atp13a4Q5XF90 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.73■□□□□ 0.91
Atp13a4Q5XF90 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atp13a4Q5XF90 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.73■□□□□ 0.91
Atp13a4Q5XF90 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atp13a4Q5XF90 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atp13a4Q5XF90 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Atp13a4Q5XF90 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atp13a4Q5XF90 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atp13a4Q5XF90 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Atp13a4Q5XF90 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Atp13a4Q5XF90 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Atp13a4Q5XF90 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Atp13a4Q5XF90 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
Atp13a4Q5XF90 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.72■□□□□ 0.91
Atp13a4Q5XF90 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Atp13a4Q5XF90 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Atp13a4Q5XF90 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atp13a4Q5XF90 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atp13a4Q5XF90 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Atp13a4Q5XF90 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Atp13a4Q5XF90 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Atp13a4Q5XF90 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Atp13a4Q5XF90 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Atp13a4Q5XF90 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Atp13a4Q5XF90 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms