Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Rnf223Q3UV31 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.7■□□□□ 0.58
Rnf223Q3UV31 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf223Q3UV31 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.7■□□□□ 0.58
Rnf223Q3UV31 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.7■□□□□ 0.58
Rnf223Q3UV31 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf223Q3UV31 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf223Q3UV31 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
Rnf223Q3UV31 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf223Q3UV31 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf223Q3UV31 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf223Q3UV31 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf223Q3UV31 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf223Q3UV31 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf223Q3UV31 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf223Q3UV31 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf223Q3UV31 Gm13534-201ENSMUST00000121169 513 ntBASIC18.69■□□□□ 0.58
Rnf223Q3UV31 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.69■□□□□ 0.58
Rnf223Q3UV31 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rnf223Q3UV31 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf223Q3UV31 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rnf223Q3UV31 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf223Q3UV31 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf223Q3UV31 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.68■□□□□ 0.58
Rnf223Q3UV31 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf223Q3UV31 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.68■□□□□ 0.58
Rnf223Q3UV31 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rnf223Q3UV31 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.68■□□□□ 0.58
Rnf223Q3UV31 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rnf223Q3UV31 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf223Q3UV31 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf223Q3UV31 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
Rnf223Q3UV31 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf223Q3UV31 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rnf223Q3UV31 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rnf223Q3UV31 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf223Q3UV31 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf223Q3UV31 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf223Q3UV31 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rnf223Q3UV31 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf223Q3UV31 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf223Q3UV31 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf223Q3UV31 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Rnf223Q3UV31 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf223Q3UV31 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf223Q3UV31 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf223Q3UV31 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf223Q3UV31 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf223Q3UV31 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rnf223Q3UV31 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rnf223Q3UV31 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Rnf223Q3UV31 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf223Q3UV31 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf223Q3UV31 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rnf223Q3UV31 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rnf223Q3UV31 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Rnf223Q3UV31 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.66■□□□□ 0.58
Rnf223Q3UV31 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Rnf223Q3UV31 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf223Q3UV31 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf223Q3UV31 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf223Q3UV31 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf223Q3UV31 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf223Q3UV31 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf223Q3UV31 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rnf223Q3UV31 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf223Q3UV31 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.65■□□□□ 0.58
Rnf223Q3UV31 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf223Q3UV31 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.65■□□□□ 0.58
Rnf223Q3UV31 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Rnf223Q3UV31 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rnf223Q3UV31 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf223Q3UV31 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rnf223Q3UV31 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf223Q3UV31 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Rnf223Q3UV31 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf223Q3UV31 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rnf223Q3UV31 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf223Q3UV31 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rnf223Q3UV31 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.64■□□□□ 0.57
Rnf223Q3UV31 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.64■□□□□ 0.57
Rnf223Q3UV31 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf223Q3UV31 Gm12933-201ENSMUST00000120203 872 ntBASIC18.64■□□□□ 0.57
Rnf223Q3UV31 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf223Q3UV31 Gm6420-201ENSMUST00000193885 723 ntBASIC18.64■□□□□ 0.57
Rnf223Q3UV31 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.64■□□□□ 0.57
Rnf223Q3UV31 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.64■□□□□ 0.57
Rnf223Q3UV31 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf223Q3UV31 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rnf223Q3UV31 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf223Q3UV31 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
Rnf223Q3UV31 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf223Q3UV31 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf223Q3UV31 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf223Q3UV31 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf223Q3UV31 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf223Q3UV31 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf223Q3UV31 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf223Q3UV31 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf223Q3UV31 Nespas-201ENSMUST00000143738 1083 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms