Protein–RNA interactions for Protein: Q3UM29

Cog7, Conserved oligomeric Golgi complex subunit 7, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cog7Q3UM29 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.73■□□□□ 0.75
Cog7Q3UM29 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cog7Q3UM29 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cog7Q3UM29 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cog7Q3UM29 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cog7Q3UM29 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.73■□□□□ 0.75
Cog7Q3UM29 Gm27801-201ENSMUST00000184174 223 ntBASIC19.73■□□□□ 0.75
Cog7Q3UM29 Gm8495-201ENSMUST00000188740 694 ntBASIC19.73■□□□□ 0.75
Cog7Q3UM29 Gm10493-201ENSMUST00000097270 612 ntBASIC19.73■□□□□ 0.75
Cog7Q3UM29 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cog7Q3UM29 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
Cog7Q3UM29 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cog7Q3UM29 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cog7Q3UM29 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cog7Q3UM29 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Cog7Q3UM29 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cog7Q3UM29 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cog7Q3UM29 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cog7Q3UM29 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cog7Q3UM29 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cog7Q3UM29 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cog7Q3UM29 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cog7Q3UM29 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cog7Q3UM29 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cog7Q3UM29 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.71■□□□□ 0.75
Cog7Q3UM29 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.71■□□□□ 0.75
Cog7Q3UM29 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cog7Q3UM29 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cog7Q3UM29 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cog7Q3UM29 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cog7Q3UM29 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cog7Q3UM29 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cog7Q3UM29 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.7■□□□□ 0.74
Cog7Q3UM29 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.7■□□□□ 0.74
Cog7Q3UM29 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cog7Q3UM29 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.7■□□□□ 0.74
Cog7Q3UM29 Gm5874-201ENSMUST00000096101 508 ntBASIC19.7■□□□□ 0.74
Cog7Q3UM29 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cog7Q3UM29 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cog7Q3UM29 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cog7Q3UM29 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cog7Q3UM29 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cog7Q3UM29 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cog7Q3UM29 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cog7Q3UM29 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cog7Q3UM29 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cog7Q3UM29 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cog7Q3UM29 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cog7Q3UM29 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cog7Q3UM29 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cog7Q3UM29 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.69■□□□□ 0.74
Cog7Q3UM29 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Cog7Q3UM29 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cog7Q3UM29 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cog7Q3UM29 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cog7Q3UM29 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Cog7Q3UM29 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cog7Q3UM29 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cog7Q3UM29 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cog7Q3UM29 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cog7Q3UM29 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cog7Q3UM29 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.68■□□□□ 0.74
Cog7Q3UM29 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.68■□□□□ 0.74
Cog7Q3UM29 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cog7Q3UM29 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cog7Q3UM29 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cog7Q3UM29 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cog7Q3UM29 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cog7Q3UM29 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cog7Q3UM29 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.67■□□□□ 0.74
Cog7Q3UM29 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cog7Q3UM29 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cog7Q3UM29 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cog7Q3UM29 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cog7Q3UM29 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cog7Q3UM29 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cog7Q3UM29 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cog7Q3UM29 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Cog7Q3UM29 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.66■□□□□ 0.74
Cog7Q3UM29 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cog7Q3UM29 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cog7Q3UM29 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.66■□□□□ 0.74
Cog7Q3UM29 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cog7Q3UM29 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.66■□□□□ 0.74
Cog7Q3UM29 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cog7Q3UM29 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.66■□□□□ 0.74
Cog7Q3UM29 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cog7Q3UM29 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cog7Q3UM29 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cog7Q3UM29 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cog7Q3UM29 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cog7Q3UM29 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cog7Q3UM29 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cog7Q3UM29 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.65■□□□□ 0.74
Cog7Q3UM29 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.65■□□□□ 0.74
Cog7Q3UM29 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.65■□□□□ 0.74
Cog7Q3UM29 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cog7Q3UM29 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cog7Q3UM29 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cog7Q3UM29 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms