Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Spg11Q3UHA3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Spg11Q3UHA3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Spg11Q3UHA3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Spg11Q3UHA3 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.98■□□□□ 0.47
Spg11Q3UHA3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
Spg11Q3UHA3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Spg11Q3UHA3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Spg11Q3UHA3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Spg11Q3UHA3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Spg11Q3UHA3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Spg11Q3UHA3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Spg11Q3UHA3 Gm21814-202ENSMUST00000203277 873 ntBASIC17.97■□□□□ 0.47
Spg11Q3UHA3 Gm44549-201ENSMUST00000208351 577 ntBASIC17.97■□□□□ 0.47
Spg11Q3UHA3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.97■□□□□ 0.47
Spg11Q3UHA3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Spg11Q3UHA3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Spg11Q3UHA3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Spg11Q3UHA3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Spg11Q3UHA3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Spg11Q3UHA3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Spg11Q3UHA3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Spg11Q3UHA3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.96■□□□□ 0.47
Spg11Q3UHA3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.96■□□□□ 0.46
Spg11Q3UHA3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Spg11Q3UHA3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Spg11Q3UHA3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Spg11Q3UHA3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Spg11Q3UHA3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Spg11Q3UHA3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Spg11Q3UHA3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Spg11Q3UHA3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Spg11Q3UHA3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.94■□□□□ 0.46
Spg11Q3UHA3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Spg11Q3UHA3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.94■□□□□ 0.46
Spg11Q3UHA3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Spg11Q3UHA3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Spg11Q3UHA3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Spg11Q3UHA3 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.94■□□□□ 0.46
Spg11Q3UHA3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Spg11Q3UHA3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Spg11Q3UHA3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Spg11Q3UHA3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Spg11Q3UHA3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.94■□□□□ 0.46
Spg11Q3UHA3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Spg11Q3UHA3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Spg11Q3UHA3 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.93■□□□□ 0.46
Spg11Q3UHA3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Spg11Q3UHA3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
Spg11Q3UHA3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Spg11Q3UHA3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Spg11Q3UHA3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Spg11Q3UHA3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Spg11Q3UHA3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Spg11Q3UHA3 AA414768-201ENSMUST00000121924 1257 ntBASIC17.93■□□□□ 0.46
Spg11Q3UHA3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Spg11Q3UHA3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Spg11Q3UHA3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Spg11Q3UHA3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.92■□□□□ 0.46
Spg11Q3UHA3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Spg11Q3UHA3 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.92■□□□□ 0.46
Spg11Q3UHA3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Spg11Q3UHA3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Spg11Q3UHA3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Spg11Q3UHA3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Spg11Q3UHA3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Spg11Q3UHA3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Spg11Q3UHA3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Spg11Q3UHA3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Spg11Q3UHA3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Spg11Q3UHA3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Spg11Q3UHA3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Spg11Q3UHA3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Spg11Q3UHA3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Spg11Q3UHA3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Spg11Q3UHA3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Spg11Q3UHA3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Spg11Q3UHA3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Spg11Q3UHA3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Spg11Q3UHA3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Spg11Q3UHA3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Spg11Q3UHA3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Spg11Q3UHA3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Spg11Q3UHA3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
Spg11Q3UHA3 Gm14859-201ENSMUST00000117752 357 ntBASIC17.9■□□□□ 0.46
Spg11Q3UHA3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Spg11Q3UHA3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Spg11Q3UHA3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Spg11Q3UHA3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Spg11Q3UHA3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.89■□□□□ 0.46
Spg11Q3UHA3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Spg11Q3UHA3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Spg11Q3UHA3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Spg11Q3UHA3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Spg11Q3UHA3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Spg11Q3UHA3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Spg11Q3UHA3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Spg11Q3UHA3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Spg11Q3UHA3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Spg11Q3UHA3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms