Protein–RNA interactions for Protein: Q3UDR8

Yipf3, Protein YIPF3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Yipf3Q3UDR8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Yipf3Q3UDR8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Yipf3Q3UDR8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Yipf3Q3UDR8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Yipf3Q3UDR8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Yipf3Q3UDR8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Yipf3Q3UDR8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Yipf3Q3UDR8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Yipf3Q3UDR8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Yipf3Q3UDR8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Yipf3Q3UDR8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Yipf3Q3UDR8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Yipf3Q3UDR8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Yipf3Q3UDR8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Yipf3Q3UDR8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Yipf3Q3UDR8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Yipf3Q3UDR8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Yipf3Q3UDR8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Yipf3Q3UDR8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Yipf3Q3UDR8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Yipf3Q3UDR8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Yipf3Q3UDR8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.81■□□□□ 0.6
Yipf3Q3UDR8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Yipf3Q3UDR8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Yipf3Q3UDR8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Yipf3Q3UDR8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Yipf3Q3UDR8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Yipf3Q3UDR8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.81■□□□□ 0.6
Yipf3Q3UDR8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.81■□□□□ 0.6
Yipf3Q3UDR8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Yipf3Q3UDR8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Yipf3Q3UDR8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Yipf3Q3UDR8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Yipf3Q3UDR8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Yipf3Q3UDR8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Yipf3Q3UDR8 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.8■□□□□ 0.6
Yipf3Q3UDR8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Yipf3Q3UDR8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Yipf3Q3UDR8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Yipf3Q3UDR8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Yipf3Q3UDR8 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.79■□□□□ 0.6
Yipf3Q3UDR8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Yipf3Q3UDR8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Yipf3Q3UDR8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Yipf3Q3UDR8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.79■□□□□ 0.6
Yipf3Q3UDR8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Yipf3Q3UDR8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Yipf3Q3UDR8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Yipf3Q3UDR8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Yipf3Q3UDR8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Yipf3Q3UDR8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Yipf3Q3UDR8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Yipf3Q3UDR8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Yipf3Q3UDR8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Yipf3Q3UDR8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Yipf3Q3UDR8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Yipf3Q3UDR8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Yipf3Q3UDR8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Yipf3Q3UDR8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Yipf3Q3UDR8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Yipf3Q3UDR8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Yipf3Q3UDR8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Yipf3Q3UDR8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Yipf3Q3UDR8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Yipf3Q3UDR8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.77■□□□□ 0.59
Yipf3Q3UDR8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Yipf3Q3UDR8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Yipf3Q3UDR8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Yipf3Q3UDR8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Yipf3Q3UDR8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Yipf3Q3UDR8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Yipf3Q3UDR8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Yipf3Q3UDR8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Yipf3Q3UDR8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Yipf3Q3UDR8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Yipf3Q3UDR8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Yipf3Q3UDR8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Yipf3Q3UDR8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Yipf3Q3UDR8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Yipf3Q3UDR8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Yipf3Q3UDR8 BC021767-201ENSMUST00000126387 1716 ntBASIC18.76■□□□□ 0.59
Yipf3Q3UDR8 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.76■□□□□ 0.59
Yipf3Q3UDR8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Yipf3Q3UDR8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Yipf3Q3UDR8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Yipf3Q3UDR8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Yipf3Q3UDR8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Yipf3Q3UDR8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Yipf3Q3UDR8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Yipf3Q3UDR8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Yipf3Q3UDR8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Yipf3Q3UDR8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Yipf3Q3UDR8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Yipf3Q3UDR8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.75■□□□□ 0.59
Yipf3Q3UDR8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Yipf3Q3UDR8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.75■□□□□ 0.59
Yipf3Q3UDR8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Yipf3Q3UDR8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Yipf3Q3UDR8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Yipf3Q3UDR8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms