Protein–RNA interactions for Protein: Q3TX51

Lrrc28, Leucine-rich repeat-containing protein 28, mousemouse

Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc28Q3TX51 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lrrc28Q3TX51 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Lrrc28Q3TX51 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrc28Q3TX51 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrc28Q3TX51 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrc28Q3TX51 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.21■□□□□ 0.51
Lrrc28Q3TX51 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.21■□□□□ 0.51
Lrrc28Q3TX51 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.21■□□□□ 0.51
Lrrc28Q3TX51 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.21■□□□□ 0.51
Lrrc28Q3TX51 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrc28Q3TX51 Gm10602-201ENSMUST00000098239 609 ntBASIC18.21■□□□□ 0.51
Lrrc28Q3TX51 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrc28Q3TX51 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrrc28Q3TX51 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Lrrc28Q3TX51 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Lrrc28Q3TX51 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrc28Q3TX51 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrc28Q3TX51 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Lrrc28Q3TX51 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Lrrc28Q3TX51 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Lrrc28Q3TX51 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrc28Q3TX51 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.2■□□□□ 0.5
Lrrc28Q3TX51 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Lrrc28Q3TX51 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrc28Q3TX51 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrc28Q3TX51 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrc28Q3TX51 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Lrrc28Q3TX51 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrc28Q3TX51 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.2■□□□□ 0.5
Lrrc28Q3TX51 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrc28Q3TX51 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lrrc28Q3TX51 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.2■□□□□ 0.5
Lrrc28Q3TX51 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrc28Q3TX51 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrc28Q3TX51 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrc28Q3TX51 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrc28Q3TX51 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Lrrc28Q3TX51 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrc28Q3TX51 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrc28Q3TX51 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Lrrc28Q3TX51 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.19■□□□□ 0.5
Lrrc28Q3TX51 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrc28Q3TX51 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.19■□□□□ 0.5
Lrrc28Q3TX51 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.19■□□□□ 0.5
Lrrc28Q3TX51 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Lrrc28Q3TX51 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Lrrc28Q3TX51 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrc28Q3TX51 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrc28Q3TX51 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrc28Q3TX51 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrc28Q3TX51 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrrc28Q3TX51 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrc28Q3TX51 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrc28Q3TX51 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Lrrc28Q3TX51 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrc28Q3TX51 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Lrrc28Q3TX51 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.18■□□□□ 0.5
Lrrc28Q3TX51 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.18■□□□□ 0.5
Lrrc28Q3TX51 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Lrrc28Q3TX51 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrc28Q3TX51 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Lrrc28Q3TX51 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lrrc28Q3TX51 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Lrrc28Q3TX51 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrc28Q3TX51 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrc28Q3TX51 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrc28Q3TX51 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrc28Q3TX51 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Lrrc28Q3TX51 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.17■□□□□ 0.5
Lrrc28Q3TX51 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrc28Q3TX51 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.17■□□□□ 0.5
Lrrc28Q3TX51 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Lrrc28Q3TX51 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrc28Q3TX51 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.17■□□□□ 0.5
Lrrc28Q3TX51 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lrrc28Q3TX51 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Lrrc28Q3TX51 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Lrrc28Q3TX51 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrc28Q3TX51 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrc28Q3TX51 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrc28Q3TX51 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrc28Q3TX51 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Lrrc28Q3TX51 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.16■□□□□ 0.5
Lrrc28Q3TX51 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lrrc28Q3TX51 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Lrrc28Q3TX51 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.16■□□□□ 0.5
Lrrc28Q3TX51 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.16■□□□□ 0.5
Lrrc28Q3TX51 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Lrrc28Q3TX51 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Lrrc28Q3TX51 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrc28Q3TX51 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrc28Q3TX51 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Lrrc28Q3TX51 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrc28Q3TX51 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrc28Q3TX51 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.15■□□□□ 0.5
Lrrc28Q3TX51 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrc28Q3TX51 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrc28Q3TX51 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrc28Q3TX51 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lrrc28Q3TX51 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms