Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.3■□□□□ 0.2
Fndc4Q3TR08 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fndc4Q3TR08 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fndc4Q3TR08 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fndc4Q3TR08 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fndc4Q3TR08 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fndc4Q3TR08 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Fndc4Q3TR08 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Fndc4Q3TR08 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.29■□□□□ 0.2
Fndc4Q3TR08 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Fndc4Q3TR08 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.29■□□□□ 0.2
Fndc4Q3TR08 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fndc4Q3TR08 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fndc4Q3TR08 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fndc4Q3TR08 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fndc4Q3TR08 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fndc4Q3TR08 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.29■□□□□ 0.2
Fndc4Q3TR08 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fndc4Q3TR08 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fndc4Q3TR08 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Fndc4Q3TR08 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fndc4Q3TR08 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Fndc4Q3TR08 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fndc4Q3TR08 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Fndc4Q3TR08 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.28■□□□□ 0.2
Fndc4Q3TR08 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Fndc4Q3TR08 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Fndc4Q3TR08 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Fndc4Q3TR08 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Fndc4Q3TR08 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Fndc4Q3TR08 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Fndc4Q3TR08 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Fndc4Q3TR08 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.27■□□□□ 0.2
Fndc4Q3TR08 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Fndc4Q3TR08 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Fndc4Q3TR08 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Fndc4Q3TR08 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Fndc4Q3TR08 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Fndc4Q3TR08 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Fndc4Q3TR08 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Fndc4Q3TR08 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Fndc4Q3TR08 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Fndc4Q3TR08 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Fndc4Q3TR08 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Mir6236-201ENSMUST00000184437 123 ntBASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Fndc4Q3TR08 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Fndc4Q3TR08 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Fndc4Q3TR08 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fndc4Q3TR08 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Fndc4Q3TR08 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fndc4Q3TR08 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Fndc4Q3TR08 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.25■□□□□ 0.19
Fndc4Q3TR08 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Fndc4Q3TR08 Golgb1-201ENSMUST00000023534 498 ntBASIC16.25■□□□□ 0.19
Fndc4Q3TR08 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fndc4Q3TR08 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Fndc4Q3TR08 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fndc4Q3TR08 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fndc4Q3TR08 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Fndc4Q3TR08 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Fndc4Q3TR08 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.25■□□□□ 0.19
Fndc4Q3TR08 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Fndc4Q3TR08 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Fndc4Q3TR08 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Fndc4Q3TR08 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Fndc4Q3TR08 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Fndc4Q3TR08 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Fndc4Q3TR08 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Fndc4Q3TR08 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Fndc4Q3TR08 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Fndc4Q3TR08 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Fndc4Q3TR08 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.24■□□□□ 0.19
Fndc4Q3TR08 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Fndc4Q3TR08 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Fndc4Q3TR08 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Fndc4Q3TR08 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Fndc4Q3TR08 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Fndc4Q3TR08 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Fndc4Q3TR08 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms