Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lim2P56563 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lim2P56563 Gm27801-201ENSMUST00000184174 223 ntBASIC19.23■□□□□ 0.67
Lim2P56563 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lim2P56563 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Lim2P56563 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lim2P56563 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lim2P56563 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lim2P56563 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lim2P56563 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lim2P56563 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Lim2P56563 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lim2P56563 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lim2P56563 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lim2P56563 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lim2P56563 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lim2P56563 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lim2P56563 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.21■□□□□ 0.67
Lim2P56563 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.21■□□□□ 0.67
Lim2P56563 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lim2P56563 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Lim2P56563 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lim2P56563 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lim2P56563 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lim2P56563 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lim2P56563 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lim2P56563 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lim2P56563 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lim2P56563 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.2■□□□□ 0.66
Lim2P56563 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Lim2P56563 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lim2P56563 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.2■□□□□ 0.66
Lim2P56563 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Lim2P56563 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lim2P56563 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lim2P56563 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Lim2P56563 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lim2P56563 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lim2P56563 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lim2P56563 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lim2P56563 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lim2P56563 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Lim2P56563 Gm8495-201ENSMUST00000188740 694 ntBASIC19.19■□□□□ 0.66
Lim2P56563 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lim2P56563 Gm5874-201ENSMUST00000096101 508 ntBASIC19.19■□□□□ 0.66
Lim2P56563 Gm10493-201ENSMUST00000097270 612 ntBASIC19.19■□□□□ 0.66
Lim2P56563 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lim2P56563 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lim2P56563 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lim2P56563 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lim2P56563 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lim2P56563 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lim2P56563 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lim2P56563 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lim2P56563 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lim2P56563 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.18■□□□□ 0.66
Lim2P56563 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lim2P56563 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.18■□□□□ 0.66
Lim2P56563 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.18■□□□□ 0.66
Lim2P56563 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lim2P56563 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lim2P56563 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lim2P56563 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lim2P56563 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lim2P56563 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lim2P56563 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.17■□□□□ 0.66
Lim2P56563 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lim2P56563 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lim2P56563 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lim2P56563 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.17■□□□□ 0.66
Lim2P56563 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Lim2P56563 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lim2P56563 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lim2P56563 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lim2P56563 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.17■□□□□ 0.66
Lim2P56563 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lim2P56563 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Lim2P56563 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lim2P56563 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.16■□□□□ 0.66
Lim2P56563 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lim2P56563 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Lim2P56563 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
Lim2P56563 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lim2P56563 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lim2P56563 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Lim2P56563 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lim2P56563 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lim2P56563 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lim2P56563 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lim2P56563 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lim2P56563 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lim2P56563 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Lim2P56563 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lim2P56563 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lim2P56563 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Lim2P56563 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Lim2P56563 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Lim2P56563 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lim2P56563 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lim2P56563 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms