Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Limk1P53668 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Limk1P53668 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Limk1P53668 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Limk1P53668 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Limk1P53668 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Limk1P53668 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.81■□□□□ 0.6
Limk1P53668 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Limk1P53668 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Limk1P53668 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Limk1P53668 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.81■□□□□ 0.6
Limk1P53668 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Limk1P53668 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Limk1P53668 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.81■□□□□ 0.6
Limk1P53668 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Limk1P53668 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Limk1P53668 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Limk1P53668 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Limk1P53668 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Limk1P53668 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Limk1P53668 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.79■□□□□ 0.6
Limk1P53668 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Limk1P53668 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Limk1P53668 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Limk1P53668 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.79■□□□□ 0.6
Limk1P53668 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Limk1P53668 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Limk1P53668 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Limk1P53668 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Limk1P53668 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Limk1P53668 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Limk1P53668 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Limk1P53668 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Limk1P53668 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Limk1P53668 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.78■□□□□ 0.6
Limk1P53668 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Limk1P53668 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.78■□□□□ 0.6
Limk1P53668 Gm6420-201ENSMUST00000193885 723 ntBASIC18.78■□□□□ 0.6
Limk1P53668 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.78■□□□□ 0.6
Limk1P53668 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Limk1P53668 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Limk1P53668 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Limk1P53668 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Limk1P53668 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Limk1P53668 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Limk1P53668 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Limk1P53668 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limk1P53668 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limk1P53668 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.77■□□□□ 0.6
Limk1P53668 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limk1P53668 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Limk1P53668 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limk1P53668 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limk1P53668 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.77■□□□□ 0.6
Limk1P53668 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Limk1P53668 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limk1P53668 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Limk1P53668 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Limk1P53668 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Limk1P53668 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Limk1P53668 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Limk1P53668 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Limk1P53668 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Limk1P53668 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Limk1P53668 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Limk1P53668 Gm6576-201ENSMUST00000169678 883 ntBASIC18.76■□□□□ 0.59
Limk1P53668 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Limk1P53668 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Limk1P53668 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Limk1P53668 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.76■□□□□ 0.59
Limk1P53668 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Limk1P53668 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Limk1P53668 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Limk1P53668 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Limk1P53668 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Limk1P53668 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.75■□□□□ 0.59
Limk1P53668 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Limk1P53668 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Limk1P53668 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Limk1P53668 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.75■□□□□ 0.59
Limk1P53668 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.75■□□□□ 0.59
Limk1P53668 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Limk1P53668 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Limk1P53668 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Limk1P53668 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Limk1P53668 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.75■□□□□ 0.59
Limk1P53668 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.74■□□□□ 0.59
Limk1P53668 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Limk1P53668 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Limk1P53668 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Limk1P53668 Gm13534-201ENSMUST00000121169 513 ntBASIC18.74■□□□□ 0.59
Limk1P53668 Gm26524-201ENSMUST00000192339 390 ntBASIC18.74■□□□□ 0.59
Limk1P53668 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Limk1P53668 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Limk1P53668 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Limk1P53668 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.74■□□□□ 0.59
Limk1P53668 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Limk1P53668 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Limk1P53668 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Limk1P53668 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms