Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pdx1P52946 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.01■□□□□ 0.63
Pdx1P52946 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.01■□□□□ 0.63
Pdx1P52946 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdx1P52946 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdx1P52946 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pdx1P52946 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.01■□□□□ 0.63
Pdx1P52946 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdx1P52946 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdx1P52946 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pdx1P52946 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pdx1P52946 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pdx1P52946 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19■□□□□ 0.63
Pdx1P52946 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Pdx1P52946 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
Pdx1P52946 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pdx1P52946 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pdx1P52946 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pdx1P52946 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Pdx1P52946 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pdx1P52946 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
Pdx1P52946 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Pdx1P52946 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pdx1P52946 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Pdx1P52946 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.99■□□□□ 0.63
Pdx1P52946 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pdx1P52946 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Pdx1P52946 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pdx1P52946 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pdx1P52946 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pdx1P52946 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pdx1P52946 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Pdx1P52946 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.99■□□□□ 0.63
Pdx1P52946 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pdx1P52946 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pdx1P52946 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Pdx1P52946 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pdx1P52946 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pdx1P52946 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Pdx1P52946 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.98■□□□□ 0.63
Pdx1P52946 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.98■□□□□ 0.63
Pdx1P52946 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pdx1P52946 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.98■□□□□ 0.63
Pdx1P52946 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pdx1P52946 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Pdx1P52946 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pdx1P52946 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pdx1P52946 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Pdx1P52946 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pdx1P52946 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pdx1P52946 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pdx1P52946 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pdx1P52946 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Pdx1P52946 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pdx1P52946 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pdx1P52946 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pdx1P52946 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pdx1P52946 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pdx1P52946 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.97■□□□□ 0.63
Pdx1P52946 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pdx1P52946 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pdx1P52946 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.96■□□□□ 0.63
Pdx1P52946 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pdx1P52946 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pdx1P52946 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pdx1P52946 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.96■□□□□ 0.63
Pdx1P52946 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pdx1P52946 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pdx1P52946 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pdx1P52946 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pdx1P52946 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pdx1P52946 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.95■□□□□ 0.62
Pdx1P52946 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pdx1P52946 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pdx1P52946 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pdx1P52946 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pdx1P52946 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pdx1P52946 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.95■□□□□ 0.62
Pdx1P52946 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pdx1P52946 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pdx1P52946 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pdx1P52946 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pdx1P52946 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Pdx1P52946 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Pdx1P52946 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.94■□□□□ 0.62
Pdx1P52946 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.94■□□□□ 0.62
Pdx1P52946 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pdx1P52946 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pdx1P52946 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pdx1P52946 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pdx1P52946 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Pdx1P52946 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pdx1P52946 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pdx1P52946 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pdx1P52946 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Pdx1P52946 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Pdx1P52946 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pdx1P52946 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.93■□□□□ 0.62
Pdx1P52946 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pdx1P52946 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms