Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
GdnfP48540 Rarb-207ENSMUST00000225921 2756 ntBASIC16.74■□□□□ 0.27
GdnfP48540 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GdnfP48540 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GdnfP48540 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GdnfP48540 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GdnfP48540 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GdnfP48540 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GdnfP48540 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GdnfP48540 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
GdnfP48540 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GdnfP48540 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GdnfP48540 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GdnfP48540 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GdnfP48540 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.73■□□□□ 0.27
GdnfP48540 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.73■□□□□ 0.27
GdnfP48540 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GdnfP48540 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
GdnfP48540 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
GdnfP48540 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
GdnfP48540 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GdnfP48540 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GdnfP48540 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GdnfP48540 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GdnfP48540 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GdnfP48540 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GdnfP48540 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GdnfP48540 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GdnfP48540 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
GdnfP48540 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GdnfP48540 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
GdnfP48540 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.72■□□□□ 0.27
GdnfP48540 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
GdnfP48540 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GdnfP48540 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GdnfP48540 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GdnfP48540 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GdnfP48540 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
GdnfP48540 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GdnfP48540 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.71■□□□□ 0.27
GdnfP48540 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
GdnfP48540 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
GdnfP48540 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GdnfP48540 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
GdnfP48540 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.71■□□□□ 0.27
GdnfP48540 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GdnfP48540 Gm43530-201ENSMUST00000195920 274 ntBASIC16.71■□□□□ 0.27
GdnfP48540 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GdnfP48540 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.71■□□□□ 0.27
GdnfP48540 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GdnfP48540 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GdnfP48540 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
GdnfP48540 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.7■□□□□ 0.26
GdnfP48540 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GdnfP48540 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GdnfP48540 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GdnfP48540 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GdnfP48540 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
GdnfP48540 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GdnfP48540 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.7■□□□□ 0.26
GdnfP48540 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GdnfP48540 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GdnfP48540 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GdnfP48540 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GdnfP48540 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GdnfP48540 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GdnfP48540 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GdnfP48540 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GdnfP48540 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
GdnfP48540 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GdnfP48540 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GdnfP48540 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GdnfP48540 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.69■□□□□ 0.26
GdnfP48540 Golgb1-201ENSMUST00000023534 498 ntBASIC16.69■□□□□ 0.26
GdnfP48540 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GdnfP48540 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GdnfP48540 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GdnfP48540 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GdnfP48540 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GdnfP48540 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GdnfP48540 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.68■□□□□ 0.26
GdnfP48540 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GdnfP48540 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GdnfP48540 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GdnfP48540 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GdnfP48540 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
GdnfP48540 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GdnfP48540 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
GdnfP48540 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GdnfP48540 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.67■□□□□ 0.26
GdnfP48540 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
GdnfP48540 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
GdnfP48540 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
GdnfP48540 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GdnfP48540 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GdnfP48540 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GdnfP48540 Gm12922-201ENSMUST00000120626 809 ntBASIC16.67■□□□□ 0.26
GdnfP48540 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GdnfP48540 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.67■□□□□ 0.26
GdnfP48540 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms