Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a13P31649 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Slc6a13P31649 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a13P31649 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.54■□□□□ 0.72
Slc6a13P31649 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.54■□□□□ 0.72
Slc6a13P31649 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a13P31649 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Slc6a13P31649 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a13P31649 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a13P31649 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a13P31649 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.54■□□□□ 0.72
Slc6a13P31649 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a13P31649 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a13P31649 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Slc6a13P31649 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.53■□□□□ 0.72
Slc6a13P31649 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a13P31649 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a13P31649 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a13P31649 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Slc6a13P31649 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a13P31649 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a13P31649 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a13P31649 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a13P31649 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a13P31649 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.52■□□□□ 0.72
Slc6a13P31649 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a13P31649 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a13P31649 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a13P31649 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a13P31649 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a13P31649 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Slc6a13P31649 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a13P31649 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a13P31649 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a13P31649 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.51■□□□□ 0.71
Slc6a13P31649 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a13P31649 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a13P31649 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Slc6a13P31649 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Slc6a13P31649 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a13P31649 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a13P31649 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a13P31649 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Slc6a13P31649 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Slc6a13P31649 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a13P31649 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Slc6a13P31649 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a13P31649 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.5■□□□□ 0.71
Slc6a13P31649 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.5■□□□□ 0.71
Slc6a13P31649 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.5■□□□□ 0.71
Slc6a13P31649 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a13P31649 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Slc6a13P31649 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a13P31649 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a13P31649 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a13P31649 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a13P31649 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
Slc6a13P31649 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Slc6a13P31649 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a13P31649 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a13P31649 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a13P31649 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Slc6a13P31649 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Slc6a13P31649 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a13P31649 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Slc6a13P31649 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a13P31649 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Slc6a13P31649 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.48■□□□□ 0.71
Slc6a13P31649 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.48■□□□□ 0.71
Slc6a13P31649 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.48■□□□□ 0.71
Slc6a13P31649 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a13P31649 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a13P31649 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a13P31649 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a13P31649 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Slc6a13P31649 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a13P31649 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a13P31649 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a13P31649 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Slc6a13P31649 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a13P31649 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Slc6a13P31649 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a13P31649 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a13P31649 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a13P31649 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a13P31649 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Slc6a13P31649 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Slc6a13P31649 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.47■□□□□ 0.71
Slc6a13P31649 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a13P31649 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.47■□□□□ 0.71
Slc6a13P31649 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a13P31649 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a13P31649 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a13P31649 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Slc6a13P31649 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.46■□□□□ 0.71
Slc6a13P31649 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.46■□□□□ 0.71
Slc6a13P31649 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a13P31649 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.46■□□□□ 0.71
Slc6a13P31649 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a13P31649 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms