Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PdgfrbP05622 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PdgfrbP05622 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PdgfrbP05622 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PdgfrbP05622 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PdgfrbP05622 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PdgfrbP05622 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PdgfrbP05622 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PdgfrbP05622 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PdgfrbP05622 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PdgfrbP05622 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PdgfrbP05622 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PdgfrbP05622 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PdgfrbP05622 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
PdgfrbP05622 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PdgfrbP05622 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PdgfrbP05622 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PdgfrbP05622 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.38■□□□□ 0.69
PdgfrbP05622 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.38■□□□□ 0.69
PdgfrbP05622 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PdgfrbP05622 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PdgfrbP05622 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PdgfrbP05622 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PdgfrbP05622 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PdgfrbP05622 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PdgfrbP05622 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PdgfrbP05622 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PdgfrbP05622 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PdgfrbP05622 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PdgfrbP05622 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PdgfrbP05622 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PdgfrbP05622 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PdgfrbP05622 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PdgfrbP05622 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.36■□□□□ 0.69
PdgfrbP05622 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PdgfrbP05622 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PdgfrbP05622 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PdgfrbP05622 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PdgfrbP05622 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PdgfrbP05622 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PdgfrbP05622 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PdgfrbP05622 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.35■□□□□ 0.69
PdgfrbP05622 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PdgfrbP05622 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.35■□□□□ 0.69
PdgfrbP05622 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PdgfrbP05622 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PdgfrbP05622 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.35■□□□□ 0.69
PdgfrbP05622 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PdgfrbP05622 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PdgfrbP05622 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PdgfrbP05622 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PdgfrbP05622 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PdgfrbP05622 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PdgfrbP05622 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PdgfrbP05622 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
PdgfrbP05622 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PdgfrbP05622 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PdgfrbP05622 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PdgfrbP05622 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.34■□□□□ 0.69
PdgfrbP05622 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PdgfrbP05622 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PdgfrbP05622 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PdgfrbP05622 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
PdgfrbP05622 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.34■□□□□ 0.69
PdgfrbP05622 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PdgfrbP05622 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PdgfrbP05622 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
PdgfrbP05622 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PdgfrbP05622 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PdgfrbP05622 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PdgfrbP05622 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PdgfrbP05622 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.33■□□□□ 0.68
PdgfrbP05622 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PdgfrbP05622 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PdgfrbP05622 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PdgfrbP05622 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PdgfrbP05622 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PdgfrbP05622 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PdgfrbP05622 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PdgfrbP05622 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PdgfrbP05622 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PdgfrbP05622 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PdgfrbP05622 Gm27801-201ENSMUST00000184174 223 ntBASIC19.32■□□□□ 0.68
PdgfrbP05622 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.32■□□□□ 0.68
PdgfrbP05622 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PdgfrbP05622 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PdgfrbP05622 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PdgfrbP05622 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PdgfrbP05622 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PdgfrbP05622 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PdgfrbP05622 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.32■□□□□ 0.68
PdgfrbP05622 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PdgfrbP05622 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PdgfrbP05622 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
PdgfrbP05622 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PdgfrbP05622 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PdgfrbP05622 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.32■□□□□ 0.68
PdgfrbP05622 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PdgfrbP05622 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PdgfrbP05622 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms