Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sp1O89090 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sp1O89090 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sp1O89090 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.5■□□□□ 0.71
Sp1O89090 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sp1O89090 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sp1O89090 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.5■□□□□ 0.71
Sp1O89090 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sp1O89090 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sp1O89090 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sp1O89090 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sp1O89090 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Sp1O89090 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.49■□□□□ 0.71
Sp1O89090 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sp1O89090 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sp1O89090 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sp1O89090 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sp1O89090 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sp1O89090 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sp1O89090 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.48■□□□□ 0.71
Sp1O89090 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Sp1O89090 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.48■□□□□ 0.71
Sp1O89090 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Sp1O89090 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sp1O89090 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sp1O89090 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sp1O89090 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Sp1O89090 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sp1O89090 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Sp1O89090 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sp1O89090 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sp1O89090 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sp1O89090 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sp1O89090 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sp1O89090 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sp1O89090 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Sp1O89090 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sp1O89090 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.46■□□□□ 0.71
Sp1O89090 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sp1O89090 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sp1O89090 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Sp1O89090 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Sp1O89090 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sp1O89090 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sp1O89090 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Sp1O89090 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sp1O89090 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sp1O89090 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Sp1O89090 Gm6420-201ENSMUST00000193885 723 ntBASIC19.45■□□□□ 0.7
Sp1O89090 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.45■□□□□ 0.7
Sp1O89090 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.45■□□□□ 0.7
Sp1O89090 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.45■□□□□ 0.7
Sp1O89090 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Sp1O89090 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.45■□□□□ 0.7
Sp1O89090 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sp1O89090 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
Sp1O89090 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sp1O89090 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sp1O89090 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.44■□□□□ 0.7
Sp1O89090 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sp1O89090 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sp1O89090 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sp1O89090 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sp1O89090 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sp1O89090 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sp1O89090 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sp1O89090 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.44■□□□□ 0.7
Sp1O89090 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sp1O89090 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.44■□□□□ 0.7
Sp1O89090 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.44■□□□□ 0.7
Sp1O89090 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sp1O89090 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sp1O89090 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sp1O89090 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sp1O89090 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sp1O89090 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Sp1O89090 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sp1O89090 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Sp1O89090 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sp1O89090 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sp1O89090 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sp1O89090 Gm12933-201ENSMUST00000120203 872 ntBASIC19.43■□□□□ 0.7
Sp1O89090 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Sp1O89090 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sp1O89090 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.43■□□□□ 0.7
Sp1O89090 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sp1O89090 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sp1O89090 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sp1O89090 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sp1O89090 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sp1O89090 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sp1O89090 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sp1O89090 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sp1O89090 Nespas-201ENSMUST00000143738 1083 ntBASIC19.42■□□□□ 0.7
Sp1O89090 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sp1O89090 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Sp1O89090 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sp1O89090 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Sp1O89090 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sp1O89090 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms