Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClppO88696 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClppO88696 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClppO88696 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ClppO88696 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.61■□□□□ 0.57
ClppO88696 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClppO88696 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.61■□□□□ 0.57
ClppO88696 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.61■□□□□ 0.57
ClppO88696 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClppO88696 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClppO88696 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ClppO88696 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClppO88696 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClppO88696 Gm37179-201ENSMUST00000194862 823 ntBASIC18.61■□□□□ 0.57
ClppO88696 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ClppO88696 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClppO88696 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClppO88696 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClppO88696 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClppO88696 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClppO88696 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ClppO88696 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ClppO88696 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClppO88696 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClppO88696 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClppO88696 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.6■□□□□ 0.57
ClppO88696 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.6■□□□□ 0.57
ClppO88696 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClppO88696 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.6■□□□□ 0.57
ClppO88696 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClppO88696 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.6■□□□□ 0.57
ClppO88696 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClppO88696 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ClppO88696 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClppO88696 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClppO88696 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClppO88696 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ClppO88696 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ClppO88696 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ClppO88696 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ClppO88696 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ClppO88696 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ClppO88696 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ClppO88696 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ClppO88696 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ClppO88696 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ClppO88696 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ClppO88696 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ClppO88696 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
ClppO88696 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ClppO88696 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ClppO88696 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ClppO88696 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ClppO88696 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ClppO88696 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ClppO88696 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ClppO88696 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ClppO88696 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ClppO88696 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ClppO88696 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ClppO88696 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
ClppO88696 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ClppO88696 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ClppO88696 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ClppO88696 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ClppO88696 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ClppO88696 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.57■□□□□ 0.56
ClppO88696 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.57■□□□□ 0.56
ClppO88696 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
ClppO88696 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ClppO88696 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ClppO88696 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ClppO88696 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ClppO88696 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ClppO88696 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.57■□□□□ 0.56
ClppO88696 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.57■□□□□ 0.56
ClppO88696 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ClppO88696 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ClppO88696 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.57■□□□□ 0.56
ClppO88696 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ClppO88696 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ClppO88696 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ClppO88696 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ClppO88696 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ClppO88696 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ClppO88696 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.56■□□□□ 0.56
ClppO88696 Gm29257-201ENSMUST00000186115 639 ntBASIC18.56■□□□□ 0.56
ClppO88696 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.56■□□□□ 0.56
ClppO88696 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ClppO88696 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ClppO88696 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ClppO88696 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ClppO88696 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ClppO88696 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ClppO88696 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ClppO88696 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ClppO88696 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ClppO88696 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ClppO88696 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ClppO88696 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms